Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01393 ATGccttcttctcttcaactCCACTGTTTCAACCCCACCGCCGACGCCACCGCTTCTGCCGCCATAGCCAACGGCCTAAACTGCCCCAAACAGGCTCAAACGCCGCCTGCACGCCGTCTCGTCACGCCGCTATCTTGCTCCGAAGTAAACGTGCCCACTCTACCAGACTCCGCGGTTCGTTATCACACGCACATGGTGGGGCCCAACCGGTCTTGCTCCTTCGTGATCCAGTCCATCGACGCGCCCGTTTCCACCGTTTGGTCCGTTGTTCGCCGTTTCGATAACCCCCAGGCCTACAAGCATTTCGTCAAGAGCTGCCACGTCATTTACGGCGACGGCATTAACGTCGGCACCCTCCGCGAGGTCCACGTCATCTCTGGCCTCCCCGCCGTGTCCAGCACAGAACGCTTAGAGATCTTGGATGATGAACGCCACGTCATCAGCTTCAGCGTGGTCGGGGGAGACCATCGCCTGAGGAACTACAGGTCTGTCACGACCCTCCACTCCAATGGGAGCGGAACAGTTGTCATCGAATCATACGTGGTTGATGTACCGGTCGGTAACACTGAGGAAGAAACCTGCATGTTCGTCGACACAATCGTACGGTGCAATTTGCAGTCCTTGGCTCAGATAGCTGAGAACATAGCCGCAAGGGACAAGAAATTGCAACAATCTTCGTG 680 0.5559 MPSSLQLHCFNPTADATASAAIANGLNCPKQAQTPPARRLVTPLSCSEVNVPTLPDSAVRYHTHMVGPNRSCSFVIQSIDAPVSTVWSVVRRFDNPQAYKHFVKSCHVIYGDGINVGTLREVHVISGLPAVSSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHSNGSGTVVIESYVVDVPVGNTEEETCMFVDTIVRCNLQSLAQIAENIAARDKKLQQSS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01393 226 Gene3D - 31 226 IPR023393 -
Bva12g01393 226 PANTHER - 43 218 - -
Bva12g01393 226 Pfam Polyketide cyclase / dehydrase and lipid transport 78 213 IPR019587 -
Bva12g01393 226 PANTHER ABSCISIC ACID RECEPTOR PYL4 43 218 - -
Bva12g01393 226 CDD PYR_PYL_RCAR_like 75 213 - -
Bva12g01393 226 SUPERFAMILY Bet v1-like 78 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01393 Bva-Chr12 12271225 12272437 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01393 K14496 - gmx:100808416 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01742 12 14507877 14509083 Bva12g01393 12 12271225 12272437 ECH
Bva02g00414 02 5791478 5792433 Bva12g01393 12 12271225 12272437 ECH
Bva01g00109 01 855227 856065 Bva12g01393 12 12271225 12272437 ECH
Bva12g01393 12 12271225 12272437 Bva12g01393 12 12271225 12272437 ECH