Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02251 ATGGAAGAATTACAAGACGACGATCAATTTTATGATACACGTGAGGAAATATCGTCCCTCACTGATGGGGCTTCAGATAGCTCACTTCATTCTAGTTCCAGTGACGACCATGTCTCCAGTGTTTCCCATTGTTTATGGTCCCAAGTTTGGACCAGTAAATTGCAATTCCAAAGCGTTCATCAGCGCCGCCAGAATTTCCTAAGATGGATGCGTCAAGAATCAGATTCAGATTTAGATGACAATTCAATGCTGGTAGAGGAATTGGCAGATCTATCTTGTGAAACGATTGAGATGCGAGTTGACCGAATCACTTCAAACAGTGGGGTAGTGTTCAGAACTTCGGAGGGGCTTCCATCAAGTCAATTTATGCTGAATTCCTTCTCAAATGATGCTTTGAAATCCACACAAAACGGTGCTATGGTGGAGGAATTTTTgtttagtataaaaaatttggatgatGGAACACAGTACATTGTAGATGAATTGGGTGAAGATGGGATGCTTCAAAAACTGCGTGTAGCAGGTTCAAACCAAATGATTAGTGTGGAAGAGTTTCAGAAAAGTCTTGGGTCATCACAGCTGGTTCAGACACTCTTGCAGAAGGACCTTGAAAACACAAGGTTATTGGCTATTGACAAAAAGAAGGTGAACAGAGGTTGGCTACGGAAACTAGGCTCCGTGGCTTGTGTCGTTGATAATCATGTGGGTGCTGAATTTGACCACAAAGCTGCTCACTTAACAGATACAGCAGGGGTATGTAAAGTTCGAGTTCATTCACATAAAAAGCGATTTAAGGAGCTTTCCTCCCTATACACTGAACAGGAGTTTCAAGCACATGATGGAGCTATTTTGACTATGAAGTTCAGTCTTGATGGAAAATATGTGGCAAGCGGTGGGAAAGATGGCATTGTGCGTGTCTGGCAATTGGTTGAGCACGAGAGATCAAGAGAATTGGACATTCTATACAATGATCCATCATGTgtatatttcaaaatgaataatttatcttctttagCATCAATTGACGTAGATAAACAGAAACTAGGTAAGAAGGAAAAGTTAAGGAGATCATCTGACTCGACTTGTGTGATTCTCCCGCCAAAGATCTTCCAAATGTTGGAGAAGCCTCTGCATGAATTCCAGGGGCACAGTGGTGAGATTTTGGATCTTTCCTGGTCCAAAAGAGGGTTTCTACTATCATCCTCTATTGATAAAACAGTTCGCCTATGGCAGGTGGGAATTGATAGATGCCTAAGAGTCTTTTTCCATAACAACTATGTGACTTGTGTCAATTTCAGTCCTGTCAATGATGATTTCTTCATCAGTGGTTCAATTGATGGAAAAGTACGTATTTGGGAAGTTCTTGGTTGTCAGGTTACTGATTACATTGATATCAGAGAGATAGTCACTTATGTGTGCTATCGCCCCAATGGAAAGGGCGCAATTGTAGGTACCATGACGGGCAATTGCCTTTTTTACGATATTATAGATAATCATCTGCAATTGGAGTCTCAGTTATGTTTACAAGGCAAAAAGAAGACTCCGGGAAAAAGGATAACGGGCGTTCAGTTTTCACCGACTGACCCAAGCAAAGTGGTGGTTGCTTCTGCTGATTCACTCGTCTGTGTACTCTCTGGAGTCGATGTCCTCTGCAGATTCAAGGGATTTAGAAGTGCAGTAAGTCAGATGGTTCCTTATTTCACCTCAGATGGGAAACACATCGTCTCTGTTAGTGAGGATTCAAACGTTTGCATCTGGAATTATAGTGGTGAGGATAGGAGTGGTTCCAAAGCAAAGAATATGTGGTGTTGCGAGAGTTTTTTATCCCAGAATGCATCGATAGCTATACCTTGGTGTGGGACTGAGTCAATGGCAGGAACAGTTTTGGCTTCAACGTTGAGGAGTGATATGAATCAGAAGATGTCATTGTCACCGGATTGTTTCTCTTTGAGTCTTGGGTTATTGGCAGAGTCGTTGCCAAAGGTGTCTGCAACTTGGCCCGAGGAGACACTCTCGGATTCCAGTCCAATGGGTGTTTCCCCATCTAGAATGTGCAAATCGGAATACAAGTTGTTGAGAAGTGCTTGCAAGGGAATTTCTAATTCCCACTTATGGGGTCTCGTGATTATAACAGCAGGATGGGATGGACGGATTAGAGTGCACCATAATTATGGGTTACCTATCCGCGTTTG 2192 0.4174 MEELQDDDQFYDTREEISSLTDGASDSSLHSSSSDDHVSSVSHCLWSQVWTSKLQFQSVHQRRQNFLRWMRQESDSDLDDNSMLVEELADLSCETIEMRVDRITSNSGVVFRTSEGLPSSQFMLNSFSNDALKSTQNGAMVEEFLFSIKNLDDGTQYIVDELGEDGMLQKLRVAGSNQMISVEEFQKSLGSSQLVQTLLQKDLENTRLLAIDKKKVNRGWLRKLGSVACVVDNHVGAEFDHKAAHLTDTAGVCKVRVHSHKKRFKELSSLYTEQEFQAHDGAILTMKFSLDGKYVASGGKDGIVRVWQLVEHERSRELDILYNDPSCVYFKMNNLSSLASIDVDKQKLGKKEKLRRSSDSTCVILPPKIFQMLEKPLHEFQGHSGEILDLSWSKRGFLLSSSIDKTVRLWQVGIDRCLRVFFHNNYVTCVNFSPVNDDFFISGSIDGKVRIWEVLGCQVTDYIDIREIVTYVCYRPNGKGAIVGTMTGNCLFYDIIDNHLQLESQLCLQGKKKTPGKRITGVQFSPTDPSKVVVASADSLVCVLSGVDVLCRFKGFRSAVSQMVPYFTSDGKHIVSVSEDSNVCIWNYSGEDRSGSKAKNMWCCESFLSQNASIAIPWCGTESMAGTVLASTLRSDMNQKMSLSPDCFSLSLGLLAESLPKVSATWPEETLSDSSPMGVSPSRMCKSEYKLLRSACKGISNSHLWGLVIITAGWDGRIRVHHNYGLPIRV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02251 730 Pfam WD domain, G-beta repeat 274 307 IPR001680 GO:0005515
Bva11g02251 730 Pfam WD domain, G-beta repeat 416 452 IPR001680 GO:0005515
Bva11g02251 730 Pfam WD domain, G-beta repeat 375 410 IPR001680 GO:0005515
Bva11g02251 730 ProSiteProfiles Trp-Asp (WD) repeats profile. 380 420 IPR001680 GO:0005515
Bva11g02251 730 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 317 IPR001680 GO:0005515
Bva11g02251 730 ProSiteProfiles Trp-Asp (WD) repeats profile. 420 454 IPR001680 GO:0005515
Bva11g02251 730 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 5 730 - -
Bva11g02251 730 MobiDBLite consensus disorder prediction 1 33 - -
Bva11g02251 730 Gene3D - 254 502 IPR015943 GO:0005515
Bva11g02251 730 SUPERFAMILY WD40 repeat-like 270 720 IPR036322 GO:0005515
Bva11g02251 730 PRINTS G protein beta WD-40 repeat signature 295 309 IPR020472 -
Bva11g02251 730 PRINTS G protein beta WD-40 repeat signature 398 412 IPR020472 -
Bva11g02251 730 PRINTS G protein beta WD-40 repeat signature 440 454 IPR020472 -
Bva11g02251 730 Gene3D - 503 641 IPR015943 GO:0005515
Bva11g02251 730 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 420 454 - -
Bva11g02251 730 MobiDBLite consensus disorder prediction 16 33 - -
Bva11g02251 730 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 309 - -
Bva11g02251 730 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 380 412 - -
Bva11g02251 730 PANTHER WD REPEAT DOMAIN 44 5 730 IPR040324 -
Bva11g02251 730 SMART WD40_4 414 453 IPR001680 GO:0005515
Bva11g02251 730 SMART WD40_4 269 308 IPR001680 GO:0005515
Bva11g02251 730 SMART WD40_4 682 722 IPR001680 GO:0005515
Bva11g02251 730 SMART WD40_4 455 494 IPR001680 GO:0005515
Bva11g02251 730 SMART WD40_4 373 411 IPR001680 GO:0005515
Bva11g02251 730 SMART WD40_4 546 587 IPR001680 GO:0005515
Bva11g02251 730 SMART WD40_4 501 545 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02251 Bva-Chr11 18145443 18149866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02251 - - gmx:100788374 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02251 11 18145443 18149866 Bva11g02251 11 18145443 18149866 ECH
Bva11g02251 11 18145443 18149866 Bva12g01924 12 15358658 15363669 ECH
Bva11g02251 11 18145443 18149866 Bva06g02997 06 18645777 18650978 ECH