Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01186 ATGACCACAGCTCAGGAAAAAGCGACGCCTTGTTGCGGCGACAATAACAACTCCACTTCTTCCGCAACTGCTCTGCGTCCCCGGAAGGATTGGCCAATCACCTCGCCCGATCCGACTGATGATACGACCCGAAACAGAGCCTCTGTCTCCACATTGATCCGCTCCGTAGATTCTTTCTCTGACCCTCCTCCTAAAACTGCTTCTACCAAAGGTATCACAGTCATGGTGAGAGCTCAAACTAGCCACCCCTTGGATCCACTATCTGCTGCTGAAATATCTGTGGCTGTTGCAACTGTCCGTGCAGCTGGGGCAACCCCTGAGTTGAGGGATAGCATGCGCTTTATTGAAGTAGTCTTGCTAGAACCAGAAAAACATGTTGTTGCATTGGCAGATGCATATTTCTTTCCACCTTTCCAGCCATCATTGCTCCCAAGAACAAAAGGTGGACCTGTGATTCCAACTAAACTTCCCCCAAGAAAAGCAAGACTAGTTGTATATAACAAAAAGTCCaatgagacaagcatatggaTTGTGGAACTCTCAGAAGTTCATGCAGCAACTCGTGGTGGCCACCATAGGGGCAAAGTCATTTCTTCTAAAGTTGTTCCAAATGTTCAGCCTCCAATGGATGCTGTGGAGTATGCTGAATGTGAAGCCGTCGTGAAGGATTTTCCTCCATTTCGAGAGGCAATGAAAAGGAGAGGCATTGAGGATATGGATCTTGTGATGGTGGATCCCTGGTGTGCTGGATATCATAGTGAAGGTGATGCTCCCAGTCGTAGACTTGCTAAACCGCTAATCTTCTGTAGAACTGAGAGTGACTGCCCCATGGAAAATGGTTATGCACGTCCAGTTGAAGGAATCCACGTACTTGTTGATATGCAAAACATGGTTGTTCTTGAGTTTGAGGACAGAAAACTTGTTCCTCTTCCACCTGCCGATCCACTAAGAAATTATACCCCTGGTGAGACACGGGGAGGAGTTGATCGAAGTGATGTGAAACCCTTACAGATTCTTCAGCCTGAAGGTCCAAGTTTTCGTGTCAATGGCCATTTTGTTGCATGGCAGAAGTGGAATTTTCGGATTGGTTTCACTCCTAGAGAGGGTTTGGTTATACATTCTGTAGCCTACATTGATGGTAGTGGAGGTCGGAGACCAGTGGCTCACAGGTTGAGTTTTGTTGAGATGGTGGTTCCTTATGGGGATCCAAATGATCCTCACTATAGGAAGAATGCTTTTGATGCTGGAGAAGATGGGCTGGGTAAAAATGCTCATTCTCTTAAGAAGGGCTGTGACTGTTTAGGCTATATCAAGTACTTTGATGCTCACTTCACAAATTTTACTGGAGGTGTTGAAACAATCGAGAATTGTGTTTGTTTGCACGAAGAAGATCATGGTATCTTATGGAAACATCAAGATTGGAGAACAGGTTTGGCTGAGGTTCGACGCTCTAGAAGGCTGTCGGTATCTTTTATCTGCACCGTGGCTAACTATGAATATGGATTTTTCTGGCATTTTTATCAGGATGGAAAAATAGAAGCTGAGGTCAAGCTCACTGGAATACTTAGCTTAGGAGCATTGCAGCCTGGTGAAACTCGAAAATATGGAACAACTATTGCCCCTGGATTATATGCACCTGTCCACCAACATTTTTTCGTTGCTCGTATGGACATGGCAGTTGATTGCAAGCCCGGGGAAGCTTTTAATCAGGTTGTTGAGCTGAATGTCAAAGTTGAAGAGCCAGGAAAGAATAATGTGCACAATAATGCATTTTATGCTGAAGAAAAACTGCTTAAATCAGAATTGGAAGCAATGCGTGACTGTGACCCTTTATCTGCTCGGCATTGGATTGTGAGGAACACAAGGACTGTAAATCGAACTGGTCAGCTAACAGGTTACAAACTAGTACCTGGTTCAAATTGTTTACCATTAGCTGGTGCAGAGGCCAAGTTTCTGAGAAGAGCAGCTTTCCTGAAGCACAACCTTTGGGTCACGCCTTATGCACGTGACGAAATGCATCCTGGAGGAGAGTTCCCTAATCAAAATCCACGTGTTGGAGAAGGTTTGGCTACTTGGGTTAAACAAAATCGATCACTGGAAGAAGCTGATATAGTTCTTTGGTATGTATTTGGAGTGACCCGTATTCCTCGATTGGAAGACTGGCCTGTTATGCCAGTGGATCGCATTGGTTTTATGCTCATGCCACATGGGTTTTTTAATTGCTCACCAGCAGTTGATGTTCCTCCAAGCTCAAGTGATATGGATGATAAGGAGAACGGGATAACTGCAAAGCCAATCCAGAATGGGTTGATTGCTAAGCTGTG 2324 0.4466 MTTAQEKATPCCGDNNNSTSSATALRPRKDWPITSPDPTDDTTRNRASVSTLIRSVDSFSDPPPKTASTKGITVMVRAQTSHPLDPLSAAEISVAVATVRAAGATPELRDSMRFIEVVLLEPEKHVVALADAYFFPPFQPSLLPRTKGGPVIPTKLPPRKARLVVYNKKSNETSIWIVELSEVHAATRGGHHRGKVISSKVVPNVQPPMDAVEYAECEAVVKDFPPFREAMKRRGIEDMDLVMVDPWCAGYHSEGDAPSRRLAKPLIFCRTESDCPMENGYARPVEGIHVLVDMQNMVVLEFEDRKLVPLPPADPLRNYTPGETRGGVDRSDVKPLQILQPEGPSFRVNGHFVAWQKWNFRIGFTPREGLVIHSVAYIDGSGGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALQPGETRKYGTTIAPGLYAPVHQHFFVARMDMAVDCKPGEAFNQVVELNVKVEEPGKNNVHNNAFYAEEKLLKSELEAMRDCDPLSARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGAEAKFLRRAAFLKHNLWVTPYARDEMHPGGEFPNQNPRVGEGLATWVKQNRSLEEADIVLWYVFGVTRIPRLEDWPVMPVDRIGFMLMPHGFFNCSPAVDVPPSSSDMDDKENGITAKPIQNGLIAKL 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01186 774 MobiDBLite consensus disorder prediction 1 25 - -
Bva11g01186 774 Pfam Copper amine oxidase, N3 domain 207 310 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva11g01186 774 Gene3D - 65 209 - -
Bva11g01186 774 SUPERFAMILY Amine oxidase N-terminal region 206 324 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva11g01186 774 Gene3D - 212 315 - -
Bva11g01186 774 Gene3D Copper amine oxidase, catalytic domain 323 749 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva11g01186 774 PANTHER COPPER AMINE OXIDASE 41 759 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva11g01186 774 MobiDBLite consensus disorder prediction 1 46 - -
Bva11g01186 774 Pfam Copper amine oxidase, N2 domain 82 180 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva11g01186 774 Pfam Copper amine oxidase, enzyme domain 336 744 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva11g01186 774 PANTHER AMINE OXIDASE 41 759 - -
Bva11g01186 774 SUPERFAMILY Amine oxidase catalytic domain 330 749 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva11g01186 774 SUPERFAMILY Amine oxidase N-terminal region 79 208 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01186 Bva-Chr11 12779243 12784154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01186 K00276 - gmx:100783091 1421.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01186 11 12779243 12784154 Bva08g00279 08 1345271 1348151 BWGD
Bva11g01186 11 12779243 12784154 Bva06g01409 06 10403406 10408828 BWGD