Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01409 ATGGCCTCAGTTTCGCAAAAGGCGACGTCTTCTTCCTCTTGCTGTTCCCCTGCCGATTCAGCTCCCATTTCCCGGCACGTTTCTCCGTCCACTGCGGCCGCCAATGTCGTACAAGAGTGGACAGATCGTTCCGACGATCAGCGTGGTCAGAAAGTAACCATGGCGGCTTTGATTCGTCCCGTGGATTCGCTTCCTGAACCTTCTACCAATCCTACTACCACTAAAGgAATCACTACAATGCCAAGGCCACACTCTAGACATCCACTGGATCCTTTATCTGTAGCTGAAATCTCCGTGGCTGTGGCAACTGTGAGAGCAGCTGGAACAACTCCTGAGgtcAGGGACAGTATGCGCTTTATGGAGGTGGTTCTGCTGGAACCGGATAAACATGTAGTTGCACTTGCTGATGCATATTTCTTTCCCCCTTTCCAACCATCTTTACTTCCTAGAACTAAAGGAGGTCCTGTTATACCGATCAAACTCCCTCCAAGACGGGCTAAACTTGTTGTTTACAATAGGAAGTCAAATGAAACTAGTGTGTGGATTGTTGAACTAACAGAAGTACATGCAGTAACTCGAGGTGGGCATCACAGGGGAAAAGTAATTTCATCACATGTTATTCCAGATGTTCAGCCTTCAATGGATGCTGTGGAGTATGCTGAATGTGAAGCTGTTGTTAAGGACTTTCCTCCCTTTAGAGAAGCCATGAGGAAAAGGGGTGTTGAAGACTTGGATCTTGTGATGGTTGATGCTTGGTGTGTTGGTTATCACAGTGAAGCTGATGCTCCCAGCAGAAGACTTGCTAAACCTCTTATATTTTGCCGAAGCGAGAGTGACTGTCCTATGGAAAATGGTTATGCACGCCCAGTTGAGGGCATTCATGTTCTTGTTGATATGCAAAACATGGTTGTGGTTGAGTTTGAAGATCGTAAGCTTGTTCCTCTGCCTCCAGTAGATCCCTTAAGGAACTATACTGCTGGTGAAACAAGAGGTGGCGCTGATAGAAGTGATGTAAAACCCTTGCAAATTATTCAGCCTGAAGGACCAAGCTTTCGGGTTAATGGGCATTATGTAGAATGGCAGAAGTGGAATTTTCGTATTGGATTTACACCCAGAGAAGGTTTAGTTATATACTCTGTTGCATATGTTGATGGCAGTAGAGGGCGAAGGCCTGTAGCTCATAGGTTGAGTTTTGTGGAGATGGTTGTACCTTATGGAGATCCAAATGATCCACATTACAGaaaaaatgcttttgatgCTGGCGAAGATGGCTTGGGCAAAAATGCACATTCTCTCAAGAAGGGTTGTGATTGTTTGGGATACATCAAGTATTTTGATGCCCACTTTACAAACTTTACTGGAGGTGTTGAAACAATTGAAAATTGTGTATGTTTGCATGAAGAGGATCACGGAATTTTATGGAAGCATCAGGACTGGAGAACTGGCTTAGCAGAAGTTCGAAGGTCTCGAAGACTTAcagtttcttttatatgtacTGTGGCTAATTATGAGTATGGATTTTTCTGGCATTTTTATCAGGATGGAAAAATTGAAGCAGAAGTTAAATTAACTGGAATTCTCAGCTTAGGAGCGTTGCTACCTGGAGAGTCTCGAAAATATGGTACCATGATTGCGCCAGGTCTATATGCACCAGttcatcaacatttttttgttgcacGCATGGACATGGCTGTTGATTCAAAACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATGTCAAAGTCGAAGACCCTGGGGAGAATAATGTCCATAATAATGCATTCTATGCCAAAGAGACTTTGCTCAGATCTGAATTGGAAGCCATGCGTGATTGTAATCCTTTGACTGCCAGGCATTGGATTGTAAGGAACACTAGGACTGCTAATAGAACTGGACAGTTAACTGGCTACAAGCTAGTACCTGGCTCAAACTGCTCACCTTTAGCGGGTTCCGAGGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAATCTTTGGGTCACACCATATTCACGAGACGAGATGTTTCCTGGAGGAGAATTTCCAAATCAAAATCCACGCGTTGGGGAAGGACTAGCTACATGGGTTAAGCAAAATCGATCTTTGGAAGAAACTGATATAGTTCTCTGGTATGTATTTGGAATTACACACGTCCCTCGGTTGGAGGACTGGCCTGTTATGCCAGTAGAGCGCATTGGTTTTATGCTCATGCCTCGTGGATTCTTCAATTGTTCCCCTGCGGTTGATGTGCCCCCCAGTTCATGTGAATTTGATTCTAAAGAAAATGACGCCAAGGACAATGGCTCTTCCAAGCCAATCCAGAGCGGATTAGTGGCAAAGCTCTA 2351 0.4351 MASVSQKATSSSSCCSPADSAPISRHVSPSTAAANVVQEWTDRSDDQRGQKVTMAALIRPVDSLPEPSTNPTTTKGITTMPRPHSRHPLDPLSVAEISVAVATVRAAGTTPEVRDSMRFMEVVLLEPDKHVVALADAYFFPPFQPSLLPRTKGGPVIPIKLPPRRAKLVVYNRKSNETSVWIVELTEVHAVTRGGHHRGKVISSHVIPDVQPSMDAVEYAECEAVVKDFPPFREAMRKRGVEDLDLVMVDAWCVGYHSEADAPSRRLAKPLIFCRSESDCPMENGYARPVEGIHVLVDMQNMVVVEFEDRKLVPLPPVDPLRNYTAGETRGGADRSDVKPLQIIQPEGPSFRVNGHYVEWQKWNFRIGFTPREGLVIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLTVSFICTVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALLPGESRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGEALNQVVEVNVKVEDPGENNVHNNAFYAKETLLRSELEAMRDCNPLTARHWIVRNTRTANRTGQLTGYKLVPGSNCSPLAGSEAKFLRRAAFLKHNLWVTPYSRDEMFPGGEFPNQNPRVGEGLATWVKQNRSLEETDIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPRGFFNCSPAVDVPPSSCEFDSKENDAKDNGSSKPIQSGLVAKL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01409 783 SUPERFAMILY Amine oxidase N-terminal region 85 211 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva06g01409 783 SUPERFAMILY Amine oxidase N-terminal region 211 328 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva06g01409 783 PANTHER COPPER AMINE OXIDASE 46 778 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva06g01409 783 Gene3D - 72 215 - -
Bva06g01409 783 Gene3D - 217 319 - -
Bva06g01409 783 MobiDBLite consensus disorder prediction 65 80 - -
Bva06g01409 783 PANTHER AMINE OXIDASE 46 778 - -
Bva06g01409 783 MobiDBLite consensus disorder prediction 755 783 - -
Bva06g01409 783 SUPERFAMILY Amine oxidase catalytic domain 335 754 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva06g01409 783 Pfam Copper amine oxidase, N3 domain 212 315 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva06g01409 783 Pfam Copper amine oxidase, N2 domain 87 186 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva06g01409 783 MobiDBLite consensus disorder prediction 1 31 - -
Bva06g01409 783 Gene3D Copper amine oxidase, catalytic domain 328 754 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Bva06g01409 783 MobiDBLite consensus disorder prediction 62 86 - -
Bva06g01409 783 Pfam Copper amine oxidase, enzyme domain 341 749 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01409 Bva-Chr6 10403406 10408828 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01409 K00276 - zju:107418311 1395.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01186 11 12779243 12784154 Bva06g01409 06 10403406 10408828 BWGD
Bva06g01409 06 10403406 10408828 Bva06g01409 06 10403406 10408828 ECH