Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00341 ATGGTGGAAGCCCAGCCAACTTTTTTTATCCCAGAGTCAATCCAGGGGATCAGCTATGACTTAGCTGGTCAGGTTAAGATGATATGGGATGTTATAAAAGCGCCACTGATTGTGCCATTGTTGAATATTGGGGTCTACATTTGCTTAGCAATGTCACTCATGCTCTTCATGGAAAGGCTTTATATGGGTGTGGTCATCATCCTCGTCAAGCTTTTCTGGCCGAAACCAGAAAAGAGGTACAATTATCAGCCCATCCAAGACGACGTCGAAATGGGTAGCTCGAATTTCCCTCATGTTCTCGTGCAAATCCCAATGTACAATGAACAAGAGGTTTACAAGGTCTCCATTGGAGCTGCTTGTGGGCTTTCGTGGCCTGCAGACCGTCTGGTGATCCAAGTGCTCGATGATTCAACTGACCCTGCCATTAAGCAAATGGTGGAGGTGGAATGCCAGAGATGGGCAAGCAAAGGACTTAACATAAGGTACCAAATCAGAGAGACCAGGGGAGGTTACAAAGCTGGTGCTCTGAAAGAAGGGCTTAAGCATGATTATGTGAAACACTGTGATTACGTGGCCATTTTCGATGCTGATTTCCGGCCAGAGCCAGATTTTCTCAGGCGAGCCATTCCCTTCTTGGAGGGCAACCCTGACATTGCCTTGGTTCAAGCTCGATGGAGATTTGTGAATGCTAATGAATGTTTATTGACGAGAATGCAAGAGATGTCTCTCGATTACCATTTCAAAGTGGAGCAAGAAGTTGGATCAGCCACTCATGCTTTCTTTGGTTTCAATGGCACAGCAGGTGTTTGGAGAATTGCTGCTATCAATGAGGCAGGAGGATGGAAAGACAGAACAACAGTAGAGGACATGGATCTTGCTGTTCGTGCAAGTCTTAGGGGCTGGAAATTTGTGTATCTTGGAGACCTTCAGGTGAAAAGTGAACTTCCTAGTACTTTAAGAGCCTTCCGCTTCCAGCAACACCGGTGGTCTTGTGGTCCTGCTAATCTATTCCGCAAAATGGTGATGGAGATAGTAAGGAACAAGAAAGTGAGATTTTGGAAGAAAGTGTATGTGATTTACAGCTTCTTTTTTGTTCGTAAAATCATTGCCCACATGGTCACCTTCTTCTTCTACTGTTTGGTGCTTCCCCTGACTATTTTGGTTCCTGAGGTTCATGTTCCAATATGGGGAGCTGTTTATATACCTTCCATCATCACCATCCTCAACTCAGTAGGAACTCCAAGGTCCATTCACCTATTGTTCTATTGGATCCTTTTCGAGAATGTGATGTCTTTGCACCGAACCAAGGCAACTCTTATTGGTTTGCTTGAAGCTGGGAGAGCAAATGAGTGGGTTGTCACTAAAAAACTTGGAGACTCCGtcaataagaagaaagaagaagagagtggCAAGAACAAGATCATGAACATCATGAAAGTGTTCAGAAGACCTAAATTCAAGATTGGAGAGagACTTCATTTATTGGAGCTGGGATTCGCAGCCTTCCTCTTCATCTGTGGCTGCTATGATTTCGTGTATGGGAAAAACAACTACTTTGTGTACCTCTTCCTTCAGACCATAACCTTCTCCATTGTCGGATTTGGCTATGTTGGGACCATCGTTTA 1625 0.4375 MVEAQPTFFIPESIQGISYDLAGQVKMIWDVIKAPLIVPLLNIGVYICLAMSLMLFMERLYMGVVIILVKLFWPKPEKRYNYQPIQDDVEMGSSNFPHVLVQIPMYNEQEVYKVSIGAACGLSWPADRLVIQVLDDSTDPAIKQMVEVECQRWASKGLNIRYQIRETRGGYKAGALKEGLKHDYVKHCDYVAIFDADFRPEPDFLRRAIPFLEGNPDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFVYLGDLQVKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCLVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLLEAGRANEWVVTKKLGDSVNKKKEEESGKNKIMNIMKVFRRPKFKIGERLHLLELGFAAFLFICGCYDFVYGKNNYFVYLFLQTITFSIVGFGYVGTIV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00341 541 PANTHER BNAC09G36340D PROTEIN 5 541 - -
Bva09g00341 541 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Bva09g00341 541 PANTHER - 5 541 - -
Bva09g00341 541 SUPERFAMILY Nucleotide-diphospho-sugar transferases 92 377 IPR029044 -
Bva09g00341 541 CDD CESA_CaSu_A2 97 333 - -
Bva09g00341 541 Pfam Glycosyl transferase family group 2 190 398 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00341 Bva-Chr9 1778190 1783879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00341 1 541 Miscellaneous Gene Families AT5G22740 79.336 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00341 K13680 - gmx:100802752 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00341 09 1778190 1783879 Bva09g00341 09 1778190 1783879 ECH
Bva04g02478 04 22558181 22561575 Bva09g00341 09 1778190 1783879 ECH
Bva13g02074 13 16455391 16460070 Bva09g00341 09 1778190 1783879 ECH
Bva09g00341 09 1778190 1783879 Bva07g02305 07 18932457 18937801 ECH