Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02305 ATGGTGGAAGCccaaccaaaattttatatcccAGAGTCAATCCAGGGGGTGAGCTATGACATAGCTGGTCAGATTAAGCTGATATGGGATGTCATAAAAGCGCCATTGATTGTGCCTCTGTTAAATTTTGCGGTGTACGTTTGCTTAGCAATGTCACTCATGCTCTTTATTGAAAGGCTATATATGGGTGTTGTCATCATCCTTGTCAAGCTTTTCTGGCCGAAACCAGAAAAGAGGTATAATTATGAGCCCATCAAAGACGACGTCGAAATGGGTGGCTCGAATTTTCCTCATGTTCTCGTGCAAATCCCAATGTACAATGAAAGGGAGGTTTACAAGGTCTCCATTGGAGCTGCTTGTGGGCTTTCATGGCCTGCAGACCGTCTCGTGATACAAGTGCTCGATGATTCAACTGACCCTGCCATTAAGCAACTGGTGGAGGTAGAATGTCAGAGATGGGCAAGCAAAGGAATTAACATAAAGTACCAAATCAGAGAGACCAGGGGAGGTTACAAAGCTGGTGCTCTGAAAGAAGGGCTTAAACATGATTATGTGAAACACTGTGATTACGTCGCCATTTTCGATGCTGATTTCCGGCCAGAGCCAGATTTTCTCAGGCGAGCCATTCCCTTCTTGGAGGGCAACCCTGACCTTGCTTTGGTTCAAGCACGCTGGAGATTTGTGAATGCTGACGAATGTTTATTGACAAGAATGCAAGAGATGTCTCTGGATTACCATTTCACAGTGGAGCAAGAAGTTGGTTCAGCCACTCATGCTTTCTTTGGTTTCAATGGCACAGCAGGTGTTTGGAGAATTGCCGCTATCAATGAGGCAGGAGGATGGAAAGACAGAACAACAGTAGAGGACATGGATCTTGCTGTTCGTGCCAGTCTTAGGGGCTGGAAATTTTTGTACCTTGGAGACCTTCAGGTGAAAAGTGAACTTCCTAGTACTTTAAGAGCCTTCCGCTTCCAGCAACACCGATGGTCTTGTGGTCCTGCCAATCTATTCCGCAAAATGGTGAAGGAGATAGTAAAGAATAAGAAAGTGAAATTTTGGAAGAAAGTGCACGTTATATATAGCTTCTTTTTGGTTCGTAAAATCACTGCCCACATGGTCACCTTCCTCTTCTACTGCGTGGTGCTTCCCCTCACAATTTTGGTCCCCGAGGTTCATGTTCCAATATGGGGAGCTGTTTATATACCTTCCATCATCACCATCCTCAACGCAGTTGGAACTCCAAGGTCCATTCACCTATTGTTCTATTGGATCCTCTTCGAGAATGTGATGTCTTTGCACCGAACCAAGGCAACTCTTATTGGTTTGCTAGAAGCTGGGAGAGTCAATGAGTGGGTTGTCACTAAAAAACTTGGAGATTCcgtcaataagaaaaaagaagaagagggtGGCAAGGGCAAGATCATGAACATCGCAAAAGTGTTCAGAAGACCTAAATTCAAGATTGGAGAGAgACTTCATTTATTGGAGCTGGGATTCGCAGCCTTCCTCTTCGTCTGTGGCTGCTATGATTTTGTGCATGGGAAGAACAACTACTTTGTGTACCTCTTCCTTCAGACCATAACCTTCTCCATTGTTGGATTTGGCTATGTTGGCACCATCGTTTG 1625 0.4357 MVEAQPKFYIPESIQGVSYDIAGQIKLIWDVIKAPLIVPLLNFAVYVCLAMSLMLFIERLYMGVVIILVKLFWPKPEKRYNYEPIKDDVEMGGSNFPHVLVQIPMYNEREVYKVSIGAACGLSWPADRLVIQVLDDSTDPAIKQLVEVECQRWASKGINIKYQIRETRGGYKAGALKEGLKHDYVKHCDYVAIFDADFRPEPDFLRRAIPFLEGNPDLALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQVKSELPSTLRAFRFQQHRWSCGPANLFRKMVKEIVKNKKVKFWKKVHVIYSFFLVRKITAHMVTFLFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNAVGTPRSIHLLFYWILFENVMSLHRTKATLIGLLEAGRVNEWVVTKKLGDSVNKKKEEEGGKGKIMNIAKVFRRPKFKIGERLHLLELGFAAFLFVCGCYDFVHGKNNYFVYLFLQTITFSIVGFGYVGTIV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02305 541 Pfam Glycosyl transferase family group 2 190 392 IPR001173 -
Bva07g02305 541 PANTHER - 5 541 - -
Bva07g02305 541 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 376 IPR029044 -
Bva07g02305 541 PANTHER BNAC09G36340D PROTEIN 5 541 - -
Bva07g02305 541 CDD CESA_CaSu_A2 97 333 - -
Bva07g02305 541 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02305 Bva-Chr7 18932457 18937801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02305 1 541 Miscellaneous Gene Families AT5G22740 79.151 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02305 K13680 - gmx:100802752 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02305 07 18932457 18937801 Bva07g02305 07 18932457 18937801 ECH
Bva09g00341 09 1778190 1783879 Bva07g02305 07 18932457 18937801 ECH