Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02478 ATGGAGCGGCTTACGACGACCCCGCTTCTTCTTGAGGCATTTCAGGCAACCAGAGACGACATTACCGTGCAACTTCAAACGGTTTGGAGCCAATTCAGACAGCCATTGATTGTTCCGATTCTGAGAATATCTGTCGTTTTGTGTTTGATGATGTCGTGTATGCTCTTCGTGGAGAGGCTTTACATGGGCATCGTCATAACTTGGGTAAAACTCTTTGGTCGGAAACCTGAGACACGTTTCAAATGGGAGGCAATGAAGGACGACACGGAGTTGGGGAGCTCTCTTTATCCAACGGTTCTGATTCAAATCCCAATGTTCAACGAAAAAGAGGTTTATAAGCTATCAATTGGAGCTACATGTGGGCTTTCCTGGccatctaataaaattataatccaAGTTCTTGATGATTCAACAGACCCAGCAATCAAGaaCTTGGTGGAGCTTGAATGCCAAAGATGGGCAAGCAAGGggataaatataaagtatgAGGTTCGAGACAACAGAACAGGCTATAAAGCAGGGGCTTTGAAAGAGGGCTTGACGCGCAGCTACGTGAAACTCTGTGATTACGTTGCTATTTTTGACGCTGATTTTCAACCAGAGCCCGATTTCCTCTGGCGCACCATTCCTTTCCTTGTGCACAACCCCGAACTTGCTCTCGTTCAGGCTCGTTGGACGTTTGTAAATGCGAATGAATGTATGATGACTAGGATGCAAGAGATGTCACTGGATTACCATTTCACCGTGGAACAAGAAGTGGGCTCTTCCACTCACTCCTTCTTTGGTTTCAACGGGACTGCGGGAGTATGGAGAATATCGGCGGTGAATGAGGCTGGTGGATGGAAAGACAGGACCACAGTTGAAGACATGGACCTTGCCGTTCGTGCTGGTCTCATGGGATGGAAATTCCTATACTTGGGCGACGTCAAGGTTAAAAGTGAGTTGCCAAGTACTTTCAAGGCCTTCCGCTACCAACAGCACCGCTGGTCTTGTGGCCCAGCCAATCTTTTCAGGAAAATGGTAATGGAGATCATAAGAAACAAGAAAGTGAGTTTGTGGAAGAAGGTATATGTGATTTACAGCTTCTTCTTGGTTCGGAAGATCATAGGGCACATTAACACATTTGTTTTCTATTGCGTGGTATTACCTGCTACTATTTTGGTGCCTGAGGTTGAGGTCCCAAGGTGGGGAGCTGTATATATGCCTACCATCATTACCATTCTCAATGCACTTGGAACTCCGAGGTCAATCCACTTAATGGTGTTCTGGATTCTTTTTGAGAATGTCATGTCTCTGCATCGGACAAAGGCATCGATCACTGGTTTACTCGAGACTAGTCGAGCGAATGAATGGATTGTCACTGAAAAACTTGGTGATGCAGTCAAGGGCAAATCGGCTACAAAAGCACCCAAGAAACCCCGATTCAGGTTTGGAGACAGGATTCACTTGTTTGAGCTTGGAGTTGGGTTGTTCCTCTTCTCTGTTGCCGGCTATGATGCTCTATTTGGGAAAAACAACTTCTTCATATTCCTTTATCTCCAAGCACTAGCATTCTTCATCGTGGGCTTTGGATATGTTGGCACCTTTGTTCCCAACTCTTA 1601 0.4491 MERLTTTPLLLEAFQATRDDITVQLQTVWSQFRQPLIVPILRISVVLCLMMSCMLFVERLYMGIVITWVKLFGRKPETRFKWEAMKDDTELGSSLYPTVLIQIPMFNEKEVYKLSIGATCGLSWPSNKIIIQVLDDSTDPAIKNLVELECQRWASKGINIKYEVRDNRTGYKAGALKEGLTRSYVKLCDYVAIFDADFQPEPDFLWRTIPFLVHNPELALVQARWTFVNANECMMTRMQEMSLDYHFTVEQEVGSSTHSFFGFNGTAGVWRISAVNEAGGWKDRTTVEDMDLAVRAGLMGWKFLYLGDVKVKSELPSTFKAFRYQQHRWSCGPANLFRKMVMEIIRNKKVSLWKKVYVIYSFFLVRKIIGHINTFVFYCVVLPATILVPEVEVPRWGAVYMPTIITILNALGTPRSIHLMVFWILFENVMSLHRTKASITGLLETSRANEWIVTEKLGDAVKGKSATKAPKKPRFRFGDRIHLFELGVGLFLFSVAGYDALFGKNNFFIFLYLQALAFFIVGFGYVGTFVPNS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02478 533 PANTHER BNAC09G36340D PROTEIN 5 532 - -
Bva04g02478 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 364 IPR029044 -
Bva04g02478 533 Pfam Glycosyl transferase family group 2 190 385 IPR001173 -
Bva04g02478 533 PANTHER - 5 532 - -
Bva04g02478 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Bva04g02478 533 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02478 Bva-Chr4 22558181 22561575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02478 1 532 Miscellaneous Gene Families AT5G03760 75.422 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02478 K13680 - zju:107432151 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02478 04 22558181 22561575 Bva13g02074 13 16455391 16460070 BWGD
Bva04g02478 04 22558181 22561575 Bva09g00341 09 1778190 1783879 ECH
Bva04g02478 04 22558181 22561575 Bva04g02478 04 22558181 22561575 ECH