Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00125 ATGGTGTTGCAGAAGAGGTTGGACTACGGATTTAATGGTTATCAGGTGCCAGCTACACCACGAGCTACCCGATCAGCAAGGAGAAGGGGTACAATTCGAAAAAGACAAGAAGACAAGCAGTTGTGTGCATTCGACTTATTGGCCACTGTAGCTGGTAATTTATTGCAAGAGAAAGAGACCTCAGCCACTTCAAGTAATAGGTCAACAGAAAAGGATCAGTATGGATTTGTCAAAGGGTGCAAGGATGCAAATAAACCATTGAAAAATGAGCTTTCTGATGAAGGAAGTTGTGACAGAAGAAGTTCCGCTGATCTTTCTTCCCAAGCATATGATCAAAATTGTAGTTTTGAAGAATTCACACATTCTGGCTTTGCTTCTATAGTAACAAGTTCTAGTCGCTCAGAGAGGTTTGTCTCTGAGAAGTCGATGAATGACAAAAGCCATATAGAAACGGGGAATTGTGctggaaaatttgaaataggtTCCTCCGGCTGTGCAGAATTTAGTTGTTTTAAGTCAGACGGTGATGTAGATAAAGTAAATGATGAGCTACACAAGATTGGGAAGATGCCCAATGGTACTGGATCGGAGATGTGCAGTTATCCATCAGATGAGAAACCGCCTGCACCATTCAGTTCACGTGGTAATGCCAAGTTGTCTGGGTTTAGTGACAACATTCCTTGTATTTTACTGTCTCCAGGTTGTGACAATGTACCAGTAGTTAGTAGAGATGATGACGAAAATGGTTCTAGGTGTACTCACCCTAGTACGACAACAAAGTCCTGTAGGCCAATGACCCGCATTGGTGACCGAAGGATAAGGAAAATATTGGCTTCTAAATATTGGAAAGCTGCTTCAGAATCCAAGGATGACACGTTTTGTAATAATCaTGGGAATTTGAAGCCAATTTGCCAAAATAGGAAGAACTTTTACAAGCGCCAAAGATCTCAAAAGAGTATGCATCAAGATGCTTCTGGTTCATCTCCTATGATACGTGGAGCTCCTGGATTGTCATCCTCGGAAGCTCGTCAACAAACTACATTGCAATCTAGAGATCATCATGTGAAGCTTAGGATAAAGTCCTTTAGAGTGCCAGAGCTTTTTATCGAGATTCCAGAAACTGCAACAATTGGGTCTTTGAAGAGGACAGTAATGGAAGCAGTGACTGCTATACTTCGAGGTGGATTACGTGTGGGTGTAGTTCTCCAGGGGAAGAAGGTCAGAGATGACAATAAAACTCTACTTCAAACAGGAATTTCTCATGACAACCAGCTGGATGCTTTGGGCTTTACATTGGAGCCTAATTCTTCACAAAGCCTCTCTCCTATTTTTGCTGCAGATTCCCCTCGCGTACCTCGTATTGAAATGCCTCAGCCTCTAACAAGgTATCCTTCCAGTCCAGCTGTAGATCATCAGAGGATTCAGGTTACTTCTGACATGTTACCTGAGAATCGAGTAACCAGTTTAGGAAACCTTGTCGAAAGTGACCATGACCCAGCTCCTTCTCCTACTAACACATCACTGGAGAAAGGTATGGCAGATTCCAAGGCGCTAGTTGCTGTTACTGAAATGAGTACGGAGGCAATCGCTGTGTTACCTGTGCACCAGAAGTCAAAGCATTCTGTGATTGCACAGCGTCGAATACGTAGACCTTTCTCTGTAGCTGAAGTTGAAGCACTGGTTCAAGCCGTAGAAAAACTGGGAACTGGGAGgTGGCGTGATGTTAAACTCCGGGCTTTTGATAATGCGAAGCATCGGACCTATGTGGATTTGAAGGACAAATGGAAAACACTGGTGCACACGGCAAGATTATCCACTCAGCAAAGGAGGGGAGAGCCTGTACCCCAACAACTTTTGGACAGGGTCCTAACTGCCCACGCATACTGGTCCCAACAGCAGACTAAGCAACAGCTCAAGCAGACGGAGACCGATACCGGCCTTCTCCTTTA 1949 0.4366 MVLQKRLDYGFNGYQVPATPRATRSARRRGTIRKRQEDKQLCAFDLLATVAGNLLQEKETSATSSNRSTEKDQYGFVKGCKDANKPLKNELSDEGSCDRRSSADLSSQAYDQNCSFEEFTHSGFASIVTSSSRSERFVSEKSMNDKSHIETGNCAGKFEIGSSGCAEFSCFKSDGDVDKVNDELHKIGKMPNGTGSEMCSYPSDEKPPAPFSSRGNAKLSGFSDNIPCILLSPGCDNVPVVSRDDDENGSRCTHPSTTTKSCRPMTRIGDRRIRKILASKYWKAASESKDDTFCNNHGNLKPICQNRKNFYKRQRSQKSMHQDASGSSPMIRGAPGLSSSEARQQTTLQSRDHHVKLRIKSFRVPELFIEIPETATIGSLKRTVMEAVTAILRGGLRVGVVLQGKKVRDDNKTLLQTGISHDNQLDALGFTLEPNSSQSLSPIFAADSPRVPRIEMPQPLTRYPSSPAVDHQRIQVTSDMLPENRVTSLGNLVESDHDPAPSPTNTSLEKGMADSKALVAVTEMSTEAIAVLPVHQKSKHSVIAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARLSTQQRRGEPVPQQLLDRVLTAHAYWSQQQTKQQLKQTETDTGLLL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00125 649 ProSiteProfiles Ubiquitin domain profile. 355 425 IPR000626 GO:0005515
Bva09g00125 649 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 645 IPR031105 -
Bva09g00125 649 ProSiteProfiles Myb-like domain profile. 544 599 IPR001005 -
Bva09g00125 649 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 544 603 IPR017930 -
Bva09g00125 649 MobiDBLite consensus disorder prediction 491 511 - -
Bva09g00125 649 Gene3D - 537 641 - -
Bva09g00125 649 SMART sant 548 601 IPR001005 -
Bva09g00125 649 SUPERFAMILY Ubiquitin-like 350 439 IPR029071 -
Bva09g00125 649 CDD SANT_TRF 550 600 - -
Bva09g00125 649 SUPERFAMILY Homeodomain-like 550 631 IPR009057 -
Bva09g00125 649 MobiDBLite consensus disorder prediction 186 213 - -
Bva09g00125 649 MobiDBLite consensus disorder prediction 313 352 - -
Bva09g00125 649 MobiDBLite consensus disorder prediction 320 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00125 Bva-Chr9 573761 579348 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00125 - - gmx:100797436 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00125 09 573761 579348 Bva07g02521 07 20139027 20144389 BWGD
Bva09g00125 09 573761 579348 Bva09g00125 09 573761 579348 ECH
Bva09g00125 09 573761 579348 Bva12g02408 12 18218371 18222946 ECH
Bva09g00125 09 573761 579348 Bva07g02521 07 20139027 20144389 ECH
Bva02g01372 02 17391083 17404323 Bva09g00125 09 573761 579348 ECH