Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01372 ATGGCCTCAAACTCAAAGGATCCGAAGCAAAATGGTGGTTTCTTTGCTTCACTTGCATCCAGTTTGTCTAATTTTACCAAATCTGTTAATGGTTTACTGGGTTATGAGGGGCTGGAGGTTATCAATCCAGAAGGGGGCACTGAAGATGCTGAAGAGGAAGCAAGAAAGGGACGATGGAAAGATGAGGACCGGGATAGTCATTGGAAAATGATGCAGAAGTATATAGGCTCTGATATCACATCAATGGTGACACTTCCGGTTATTATTTTCGAGCCAATGACAATGGTTCAGAAAATGACTGAGTTAATGGAGTACTCCTACCTGTTAGATATGGCGAATGAGTGTGAGGATCCATACATGCGACTAGTGTATGCTTCATCTTTCTTCATATCTGTCTACTATGGCTTACAAAGGACATGGAAACCATTCAATCCAATACTTGGTGAGACATATGAAATGGTTAATCATGGTGGCATCACATTTATAGCAGAACAGGTCAGTCATCACCCTCCAATGagtgctgcccatgctgaaaATGAGCACTTTACTTATGATATTACTTCAAAAGTGAAAACCAAATTTCTTGGAAACTCGGTTGATGTATATCCTCTTGGAAGGACCCGTGTTACCCTCAAAAAAGATGGCGTGGTCCTTGATTTGGTTCCTCCTCCTACAAAAGTTAACAACTTGATatttggacgaacttggattgATTCACCAGGGGAGATGGTCCTAACCAATATGACCACAGGGGACAAAGTGGTGCTCTATTTTCAACCATGCGGCTGGTTTGGtgCTGGTCGATATGAAGTGGATGGATATGTGTATAATGCCGATGAGGAACCCAAGATACTGATAACTGGAAAATGGAACGAGTCCATGAGTTATCAACCTTGTGACCCAGAAGGAGAACCGCTTCCAGGCACCGAGCTAAAAGAGTCTTGGAGAGTGGCAGAAGCTCCAAAAAATGACAAGTTCCAGTACACATATTTTGCACACAAGATAAACAGCTTTGACACTGCTCCCAAGAAGTTGTTGGCATCAGATTCTCGTCTACGCCCGGATAGAATGGCGCTGGAGAAGGGAGACCTCTCGAAATCTGGCTATGAAAAGAGCAGTCTGGAGGAGCGGCAGAGAGCCGAGAAGAGAAACCGAGAAGCCAAGGGCCATAAATTCAGTCCTAGATGGTTTGATCAAACAGATGAAGTTGCTGCCACCCCTTGGGGAGACTTGGAGGTTTACCAGTACAATGGTAAATATGCAGCCCATCGACAAGCCATAGATAGTTCTGACAGCATTGATAATGCTGACAACACGACAGAGTTCAACCCTTGGCAATATGATAATGTTAATGCTGAATTGGGGAGCCTTCCACGTGGTAAGCAGAGAACTCACATGGAGAGCAGCGAGTGGATCACCCCAAACGGAGGAACTGGTCTGGTCCAAGTGGTTTTGCTAAAACCACCTGCCATAGCCGTTCCCGTTTCCAGGTCTGATTTTGGGTGTCTGCAAAATTCAAGGAAGCTAGTGCCTGTCATTCCTAGGGCTTCGAGATCCCCTAGGGGGAGGGGCGCAGTCAGGAAGAGGGATGAGAGCAACCAGATACACGCTTTCGAAATATTGGCTAGTGTAGCTGGCAACTTTCTGCAGGAGAATGAGAATTCTATCCCAGATGATGCTGCTTTTGGAAAAGATCGATGCCATCTTGTTGGGATTAACTTGGAAGATAAGCAAGAGGAGGAAGCTGAGTCATTTAAGGGAGATTTTTTTGAGCATGGAAGTTGCAGCGAGAATGACTCTGGCTGTGTCCATGTTTTACAAGGGAAACATGATGACCAAAGAGTCATGGGTGATTCATCATTTCATGTTGATCATCTCGAGGGCCAAGGACAAAATATCCTTGAGAGGGAAGGAAATGGGCAGCTAAAAGTCAGAATtatgaacaagaaaattaactCTGTTACAAGCTGCTTTGATGGACTGATAGAACCAGATTACAAAGCTTCTAACTTGCACAGTTCAGAAAATTATGTAGAAAAGCCTTTGTTGGAGGATTTCATGAATATTGGTTCTTTAACTGATGGTTCCACTCGTAGGAAATTAGTTAATAGAGATGATGACGAAAACTATGTTAATCGAAAAAGTGGAAAATGTTTCAGTAGTAAGGTATCTGACCCACTTGATATGGTAATCGAAAAAGTGGAAAATGTTTCTAGTTCCCAAAGTTGTGGAGTGGGCCAAAAATTGAAGGATGCGAGTCCCTATAAAATTGAAGACAACAAAGTCATGGACGATGAAAGTTCACAGAAGATGTATCCatttaagaaaaggaagatcTTTACTCAGACATTGTCAACGGCATCTGATAAGGGGTCTAACTGTCAAGGCATATTTGATTCTTCTGACACCAGAGTCAACGATGGAAACCAAAATGCAGGTGCAACATCAGTTGAAGATTCATCGTCTATTACTGGTCGAAAAGTACATCCCGGGTCCAGGGATTCCAATGTGAAGCTTAGCATTAAATCCTTTAAAGTCCCTGAGCTTTTTATTGATATCCCTGAAACTGCAACAATTGGTTCACTCAAGAGATCAGTAATGGAGGCAGTGACTACTATACTAGGAGATGAATTACATGTAGGCATCCTTCTTCAGGGAAAGAAGGTTCGAGATGATAGTAAAACTCTATTCCAGACAGGGATTTCTCAAGAAGACAAACATCAAAGGTTGGGATTTATGTTGGAGCCAAGTCATACTCGAAATTCTCGATCTGCATTTAATGAAGACCCTTGTTTTCTAACCACTGGTTCACCACTGGAAGTATCTAGGCAATCAACTTCTCTGATGTTACAACGAGGAACTTATAATGTCCCCAAAGAGCCTTCTGTgattaaaattgaaagttgTGCTGAAGGTGACCTTAAAATGGTTCCCTCTCGAGCAGACACTTCAGTTAACAATACCATGTCAAAGTGCCGTGCTCTGGTTGCAGTTCCAGCCATCAACATGGAGGCATTGGCTGTGGTTCCCCTTCGCCGCAAGAATCCTGACTTTGCACAACGTCGAATCAGGCGGCCATTCTCGGTTCCTGAAGTAGAAGCATTGGTTCAAGCAGTTGAAAAACTTGGAACTGGAAGATGGCGCGATGTAAAACAGCGTGCTTTTGACCATGCAAAGCATCGGACTTACGTAGATTTAAAGGATAAGTGGAAGACATTGGTGCACACAGCAAGAATCTCACCTCAGCAAAGAAGAGGGGAACCTGTTCCTCAGGAGCTTTTGGACAGGGTCTTAGCTGCTCATGCCTACTGGTCTCAACAGCAATGTCCTGAGGAGACTTCGCTGGTGGAGACACCAGGCCAACAACATATAAGCTCCCTGCTCTCCACTGCtgtttctcttatttcttttcctcgTATCATCTTGCTGCTTGCTTTTGGACTTGCGGGTCTCTGGGAGGTTTTGAAGGACTTACTATTTGTGGAACGTAGAAAAGTTGTTCAGAAAGCAGTGGAATTGCTTTTGAAGATAATTTA 3536 0.4231 MASNSKDPKQNGGFFASLASSLSNFTKSVNGLLGYEGLEVINPEGGTEDAEEEARKGRWKDEDRDSHWKMMQKYIGSDITSMVTLPVIIFEPMTMVQKMTELMEYSYLLDMANECEDPYMRLVYASSFFISVYYGLQRTWKPFNPILGETYEMVNHGGITFIAEQVSHHPPMSAAHAENEHFTYDITSKVKTKFLGNSVDVYPLGRTRVTLKKDGVVLDLVPPPTKVNNLIFGRTWIDSPGEMVLTNMTTGDKVVLYFQPCGWFGAGRYEVDGYVYNADEEPKILITGKWNESMSYQPCDPEGEPLPGTELKESWRVAEAPKNDKFQYTYFAHKINSFDTAPKKLLASDSRLRPDRMALEKGDLSKSGYEKSSLEERQRAEKRNREAKGHKFSPRWFDQTDEVAATPWGDLEVYQYNGKYAAHRQAIDSSDSIDNADNTTEFNPWQYDNVNAELGSLPRGKQRTHMESSEWITPNGGTGLVQVVLLKPPAIAVPVSRSDFGCLQNSRKLVPVIPRASRSPRGRGAVRKRDESNQIHAFEILASVAGNFLQENENSIPDDAAFGKDRCHLVGINLEDKQEEEAESFKGDFFEHGSCSENDSGCVHVLQGKHDDQRVMGDSSFHVDHLEGQGQNILEREGNGQLKVRIMNKKINSVTSCFDGLIEPDYKASNLHSSENYVEKPLLEDFMNIGSLTDGSTRRKLVNRDDDENYVNRKSGKCFSSKVSDPLDMVIEKVENVSSSQSCGVGQKLKDASPYKIEDNKVMDDESSQKMYPFKKRKIFTQTLSTASDKGSNCQGIFDSSDTRVNDGNQNAAVEDSSSITGRKVHPGSRDSNVKLSIKSFKVPELFIDIPETATIGSLKRSVMEAVTTILGDELHVGILLQGKKVRDDSKTLFQTGISQEDKHQRLGFMLEPSHTRNSRSAFNEDPCFLTTGSPLEVSRQSTSLMLQRGTYNVPKEPSVIKIESCAEGDLKMVPSRADTSVNNTMSKCRALVAVPAINMEALAVVPLRRKNPDFAQRRIRRPFSVPEVEALVQAVEKLGTGRWRDVKQRAFDHAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQCPEETSLVETPGQQHISSLLSTAVSLISFPRIILLLAFGLAGLWEVLKDLLFVERRKVVQKAVELLLKII 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01372 1175 SUPERFAMILY Ubiquitin-like 829 902 IPR029071 -
Bva02g01372 1175 CDD SANT_TRF 1022 1072 - -
Bva02g01372 1175 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 510 1107 - -
Bva02g01372 1175 PANTHER TELOMERIC REPEAT BINDING PROTEIN 510 1107 IPR031105 -
Bva02g01372 1175 ProSiteProfiles Myb-like domain profile. 1016 1071 IPR001005 -
Bva02g01372 1175 MobiDBLite consensus disorder prediction 48 62 - -
Bva02g01372 1175 ProSitePatterns Oxysterol-binding protein family signature. 164 175 IPR018494 -
Bva02g01372 1175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1016 1075 IPR017930 -
Bva02g01372 1175 SUPERFAMILY Oxysterol-binding protein-like 60 439 IPR037239 -
Bva02g01372 1175 SUPERFAMILY Homeodomain-like 1022 1103 IPR009057 -
Bva02g01372 1175 MobiDBLite consensus disorder prediction 801 826 - -
Bva02g01372 1175 Gene3D - 1010 1112 - -
Bva02g01372 1175 MobiDBLite consensus disorder prediction 801 831 - -
Bva02g01372 1175 MobiDBLite consensus disorder prediction 43 62 - -
Bva02g01372 1175 SMART sant 1020 1073 IPR001005 -
Bva02g01372 1175 Gene3D - 149 325 - -
Bva02g01372 1175 Pfam Oxysterol-binding protein 67 424 IPR000648 GO:0008289
Bva02g01372 1175 MobiDBLite consensus disorder prediction 357 391 - -
Bva02g01372 1175 Gene3D - 356 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01372 Bva-Chr2 17391083 17404323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01372 - - vra:106754557 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01372 02 17391083 17404323 Bva12g02408 12 18218371 18222946 ECH
Bva02g01372 02 17391083 17404323 Bva02g01372 02 17391083 17404323 ECH
Bva02g01372 02 17391083 17404323 Bva09g00125 09 573761 579348 ECH
Bva02g01372 02 17391083 17404323 Bva07g02521 07 20139027 20144389 ECH