Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01440 ATGGTGAAGGGTCCAGGTCTCTACACCGATATCGGCAAGAAGGCTCGAGATCTTCTCTACAAGGATTATCAGAACGATCACAAGTTCACCCTCACCACTTTCACTTCCACTGGAGTTGCAATCACTTCTACTGGAATTAAAAAGGGGGAGATATATCTGGCAGATGTTGCCACTCAGCTGAAGAATAAGAATATCACAACCGATGTGAAAGTGGATTCAACTTCAAATGTTCGTACAACAATCACTATTGACGAACCTGCACCTGGACTCAAGGCAATTTTTAGCTTCGTTGTTCCAGACCAGAGATCTGGCAAGGCGGAACTCCAATACCTGCATGAATATGCTGGAATTAATACTAGCATTGGATTGACAGCAAATCCCGTGGTTAACTTCTCTGGTGTGGTTGGAAACAATATTGTTGCTGTTGGGACTGATCTTTCATTTGATACTGCTTCTGGCAATTTCACCAAATACAATGCGGGGTTGAATTTCATTCATTCTGACCTGATTGCATCCCTCACTTTGAATGATAAAGGTGATACCCTTAGTGCCTCCTATTACCACACTGTAAGCCCTTTGACTAACACTGCTGTTGGTGCGGAGCTTTCCCATAGCTTTTCGAGCAACGAAAATACTCTTACCATTGGCACTCAGCATGCACTTGACCCCTTAAGCTTGGTGAAAGCTCGAGTGAACAACTATGGCAAGGCAAGTGCACTCCTCCAGCATGATTTGAACCCCAAAACCCGTGTTACTATCTCTGGTGAGGTGGACACCAGGGCCATTGAAAAAAGTGCAAAGGTTGGTCTAGCTGTGGCACTGAAGCCCTA 830 0.4482 MVKGPGLYTDIGKKARDLLYKDYQNDHKFTLTTFTSTGVAITSTGIKKGEIYLADVATQLKNKNITTDVKVDSTSNVRTTITIDEPAPGLKAIFSFVVPDQRSGKAELQYLHEYAGINTSIGLTANPVVNFSGVVGNNIVAVGTDLSFDTASGNFTKYNAGLNFIHSDLIASLTLNDKGDTLSASYYHTVSPLTNTAVGAELSHSFSSNENTLTIGTQHALDPLSLVKARVNNYGKASALLQHDLNPKTRVTISGEVDTRAIEKSAKVGLAVALKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01440 276 Gene3D Porin 1 275 IPR023614 -
Bva08g01440 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Bva08g01440 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Bva08g01440 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Bva08g01440 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Bva08g01440 276 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01440 Bva-Chr8 7552081 7554626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01440 K15040 - egr:104453979 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01440 08 7552081 7554626 Bva08g01440 08 7552081 7554626 ECH
Bva08g01440 08 7552081 7554626 Bva06g01259 06 9643222 9644536 ECH
Bva08g01440 08 7552081 7554626 Bva05g00446 05 2205786 2207031 ECH
Bva08g01440 08 7552081 7554626 Bva03g01276 03 12473482 12476698 ECH