Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00446 atgagCAAATGTCCAGgcttatattttgatatggGCAAAAAGGCCAGAGagGTTCTTCACAAGGATTATGCTCAGCAACCACCTATTCACTTTCACTACCAAGTCATGGACTGGAATTTAGATCTTTCTTGTCAAGTTGAAGAAATTGTACCTGGGCTAAGGAGCCTCTGCAAATTTAACATACCTGATTCTGGCAAGGTGGAACTGCAATACTTGAATGACTTTACCGGAATTACTGGATGCATCGGATTAATAGGGAACCCTTTAAAAGGATATGACCCTGTTGTAAACTTGTCAGGTCTAATAGGCACTAGAATTCTTTCTCTGGGGACAAATCTTGCTTTTAACATATCGACAAGGACATTCAACAAACTCAGTGCCGGTTTGAGCTTCAACAGTGCCTTCCTTGCTGCTTCCTTGACCATGCACGACAAGTTTGACACCCTGAAAGCTTCTTTGTATCATGCTGTGAACCCCTTAACGAATACAGCCATAGCAGCAGAGGTGAAGCACAGCTTTTCAGTCAACGAGACTGGTGTCACCATTGGTGCTCAACATGCACTACTTCCATTCACAATGCTTAAGGCTCGACTGGACACTTACGGCAAGGCAGGTGCTGTTATTCAGCAGCAACTCTTTCAAAGGTTGTTTATAACTTTTGCTGGAGAGATGGACTTTACAGCTGCAACTAAACTCCCCAAGATTGGATGTTCCATGGCCCTAAGGCCTTA 731 0.4241 MSKCPGLYFDMGKKAREVLHKDYAQQPPIHFHYQVMDWNLDLSCQVEEIVPGLRSLCKFNIPDSGKVELQYLNDFTGITGCIGLIGNPLKGYDPVVNLSGLIGTRILSLGTNLAFNISTRTFNKLSAGLSFNSAFLAASLTMHDKFDTLKASLYHAVNPLTNTAIAAEVKHSFSVNETGVTIGAQHALLPFTMLKARLDTYGKAGAVIQQQLFQRLFITFAGEMDFTAATKLPKIGCSMALRP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00446 243 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 243 IPR001925 GO:0005741|GO:0008308|GO:0098656
Bva05g00446 243 Pfam Eukaryotic porin 37 229 IPR027246 GO:0005741|GO:0055085
Bva05g00446 243 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 243 - -
Bva05g00446 243 CDD Porin3_VDAC 5 242 IPR001925 GO:0005741|GO:0008308|GO:0098656
Bva05g00446 243 Gene3D Porin 3 242 IPR023614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00446 Bva-Chr5 2205786 2207031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00446 K15040 - gmx:100787061 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01259 06 9643222 9644536 Bva05g00446 05 2205786 2207031 ECH
Bva03g01276 03 12473482 12476698 Bva05g00446 05 2205786 2207031 ECH
Bva08g01440 08 7552081 7554626 Bva05g00446 05 2205786 2207031 ECH
Bva11g01036 11 11943918 11946701 Bva05g00446 05 2205786 2207031 ECH
Bva05g00446 05 2205786 2207031 Bva05g00446 05 2205786 2207031 ECH