Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01276 ATGGTCGACATAATATTAAACAGGTTAAATTCCAGATCAAACGGTCATTACATTTTCTTCTGGAAATTATTCCCTCACCtccccaaaaagaaaactgagAATTCATCCATGGCCAAGGGTCCAGGTCTCTACTCCGACATCGCCAAAAAGGCCAGAGATCTCTTGTACAAGGACTACCAGAGTGACCAAAAGTTCACTCTCACCACCTACTCGCCCACTGGAGTCGCTATAACAACATCGGGAACCAGGAAGGGGGAACTATTCTTGGCTGATGTTACTACTCAGTTGAAGCGTAGAAATGTCACCACTGATGTCAAAGTAGACACAGATTCTAATCTCACCACAACCATCACGATTGATGAGCCTGCGCCTGGTTTGAAGGCAATCTTTAGCTTCCGTCTACCTGATCAGAGGTCAGGAAAGGTAGAAGTTCAGTACCAGCATGACTATGCTGGGATAAGTTCCAGTCTTGGGTTGACAGCAAACCCTGTTGTCAACTTCTCTGGTGTTTTAGGTACCAATGTTCTTGCACTTGGTGCTGATCTTTCCTTTGACACCAAATCCGGAGATTTTACCAAACTCAATGCTGGGGTGAACTTGACCCATGCAGACTTGATTGCGTCAGTGACGCTGAATGACAAGGGTGATGCTTTGAATGCATCATATTACCAGCTTGTCAACCCTCTGACCAACACTGCTGTTGGCGCCGAGGTCAGTCACAGGTTCTCAACCAATGAGAACACCTTCACGCTTGGCACCCAGCATGCTCTGGATCGATTTACTACGCTGAAGGCTCGTGCCAACAACTTTGGCAAGGTAAATGCGCTTATCCAGCATGAGTGGCGCCCCAAATCGTTCTTCACCATCTCCGGGGAGGTAGACACCAAGGCCATCGAGAAGAGCGCCAAGATTGGGTTGGCTTTGGCTCTCAAGCCCTG 938 0.4691 MVDIILNRLNSRSNGHYIFFWKLFPHLPKKKTENSSMAKGPGLYSDIAKKARDLLYKDYQSDQKFTLTTYSPTGVAITTSGTRKGELFLADVTTQLKRRNVTTDVKVDTDSNLTTTITIDEPAPGLKAIFSFRLPDQRSGKVEVQYQHDYAGISSSLGLTANPVVNFSGVLGTNVLALGADLSFDTKSGDFTKLNAGVNLTHADLIASVTLNDKGDALNASYYQLVNPLTNTAVGAEVSHRFSTNENTFTLGTQHALDRFTTLKARANNFGKVNALIQHEWRPKSFFTISGEVDTKAIEKSAKIGLALALKP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01276 312 CDD Porin3_VDAC 41 311 IPR001925 GO:0005741|GO:0008308|GO:0098656
Bva03g01276 312 Pfam Eukaryotic porin 40 305 IPR027246 GO:0005741|GO:0055085
Bva03g01276 312 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 35 312 IPR001925 GO:0005741|GO:0008308|GO:0098656
Bva03g01276 312 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 35 312 - -
Bva03g01276 312 Gene3D Porin 28 311 IPR023614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01276 Bva-Chr3 12473482 12476698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01276 K15040 - gmx:100170728 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01276 03 12473482 12476698 Bva06g01259 06 9643222 9644536 ECH
Bva03g01276 03 12473482 12476698 Bva05g00446 05 2205786 2207031 ECH
Bva03g01276 03 12473482 12476698 Bva03g01276 03 12473482 12476698 ECH
Bva08g01440 08 7552081 7554626 Bva03g01276 03 12473482 12476698 ECH
Bva11g01036 11 11943918 11946701 Bva03g01276 03 12473482 12476698 ECH