Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00827 ATGGGTTCTATTTGTGGGGACGAGGCAATGCAAGGTCTGAATGGCCGTGAGGAGAGAATTTATGTTACTGTTCGTATGCGACCTTTAAATGAGAAGGAGATTGCTAGACATGATGTGTCGGATTGGGAATGCATCAATGATACTACCATCATATATAGGAACAACCTTTCAGCTTCCGAAAGGTCCCTGTACCCAACAGCTTATACATTTGACAGAGTATTTAGGCACGATTGCTCCACAAGGCAGGTGTATGAAGAAGCAGCTAAAGAAGTTGCTCTTTCAGTTGTCAGTGGCATCAACTcAAGCGTTTTTGCTTATGGACAAACAAGCAGTGGAAAAACATACACCATGAGTGGTATAACTGAGTACACTGGAGCAGACATTTTTGACTACATAGAAAAGCACAAGGAAAGACAATTTGTTTTGAAGTTTTCGGCGATTGAGATCTATAATGAATCTGTCAGGGACCTCCTTAGCTCAGACAGTAGTCCACGCAGACTTCTTGATGATCCAGAGAGAGGGACAGTCATTGAGAGACTCACCGAGGAAACTTTGATGGATTGGAACCATTTTACAGAACTTATTTCTTTCTGTGAAGCTCAAAGGCAGATAGGGGAGACATCCATGAACGAAGCAAGCTCCAGATCCCATCAGATTCTCAGACTGACAATCGAAAGTTCTGCACGTGAGTTTTTAGGAAATGACAAGTCAAGCTCTCTTTCTGCTTCTGTGAATTTTGTTGATCTAGCAGGAAGTGAACGTGCATCCCAGACATTATCAGCTGGCGCAAGGTTGAAAGAGGGTTGCCACATAAATCGTAGTTTACTAACTCTAGGAACTGTTATCCGCAAACTCAGCAAGGGGAGAAATGGGCATATTCCTTTCAGAGATTCGAAGCTAACCCGCATACTGCAGTCCTCCTTAGGAGGCAATGCCAGAACTGCAATCATCTGCACCATGAGCCCTGCACGGAGCCATGTTgaacaaacaagaaatacCCTCTTATTTGCAAGTTGTGCTAAAGAAGTGTCAACTAATGCTCAGGTCAATGTAGTGATGTCTGATAAAGCTCTGGTTAAGCAATTGCAAAGAGAATTGTCTAGGCTGGAAAATGAGTTGAGAAATTCAGGCACAGCCTTGCTTACATCTGATGCTGCTGcattattaagagaaaaagacCTCCAAATTGAGAAGTTAAAGAGAGAGGTAACTGAGTTGACTTTGCAACGAGACCTTGCTCATTCTCAGATTAAGGATATGCTTCATGTGGTCGGAGATGATTATTCTTCATTGGAATTGGAAAGTTTGGAACCTCAATATCCTAAATTACGCGTGCGAAGTTCATTGGACTTCGAAAATCATGCAGAGGCACCAAAATTATTTGGTTTTCACTCTAAAGATAGTGTCGGATCTTTTGATGCATCTCAATATTCAGATGGACACAGTTTTAGTTCTGATGATAACTTGTTCCAACTTCCTGatttagaaaagaattttccCCGTAGAAATTCTTCCCCGCCGCTGACAATTACTGTAAGGAGTGACTGGGAACaggagaaaattgaagaacagCATCCGGAAATTTTAGAGGATCTTTGTAAGGAAGTTAGGTGCATTGACTCAGAAGATCCAATTACTGACAGATATATACGTTCAGACATGATTGACTTGAGCCCGAATCACTATGCTGACTCTAATGTGTCATCTCCTCGGGAAAATACAGCTACCACCTCAGGATTGATCATAGATGAGAATAGAGACAATAAGGATTTGGGCTCatctatattaaaagaatgCAAAAAAATGAACAGCTTCCGCCAACTTTTAGCTGTTCCCCCActagagaaaatttttccgattgattctgaaaataataCACCTTGCTCTAGAAGAAGATTGAAGTTGACCAGAACTAAAAGTTGTAAAGCAAGTCTCATGAGGAATTCATCTTCAGATTGGtttgacaaggaagaaataatCGAAACCACACCCCCAACAGGGATTGAAAAAGAATTCACTGGAAGACCTGAGGGAATTCAGAGGAAGTCATTCACGCTAAATTACAATGCCAATGCTGAGAGGCAGTTTGGGAATGGTTCTGAGAATTATCGGGAAAGTGCAGATCTTGAAAGTGTGAAGCAACTGGCGAACCACCAGGTTCAGGAGACAGAAGCAATCATGCCGGCAAAGAATTTCAAAGATGTTGGCTTGGACCCCATTCAATCTGATGGCGAGACTCCTTCAGATTGGCCTTCAGATTTCAAGAAGCACCAAAGAGAGATTATTCAGCTATGGCATGAATGTCATGTTTCGTTGGTTCATCGAACTTactttttccttctatttaaAGGTGAGTCATCAGATTCTATTTACATGGAGGTAGAACTGAGGAGGCTATCCTTTCTCAAGGATACTTTTTCCCGAGGTGATCAGACCGTGGAAGATGGTCGAACTCTTACACCCTCTTCAAGCATGAGATATCTCCGAAGAGAGAGGCAGATGTTGAGCAAGCAAATGCATAGGCGAATGTCTAGAGCTGAAAGGGATAACCTCTACAAAAAATGGGGCATTAAAATGAACTCAAAGCACAGGAGGTTGCAGTTGGCCCACCTCTTGTGGAATGACACAGAAGACATGAACCACATCAGAGAGAGTGCCGCCATTGTTGCAAAGCTGGTTTGTACAGTAGAGCCAGACGAAGCTTTGAAGGAAATGTTTGGACTCAACTTTGCCCCACGACAAACATCTCATAGAAGGAAATCTTTTGGGTGGACTGTTAGCATGAAGCTTACTTTGTG 2798 0.4049 MGSICGDEAMQGLNGREERIYVTVRMRPLNEKEIARHDVSDWECINDTTIIYRNNLSASERSLYPTAYTFDRVFRHDCSTRQVYEEAAKEVALSVVSGINSSVFAYGQTSSGKTYTMSGITEYTGADIFDYIEKHKERQFVLKFSAIEIYNESVRDLLSSDSSPRRLLDDPERGTVIERLTEETLMDWNHFTELISFCEAQRQIGETSMNEASSRSHQILRLTIESSAREFLGNDKSSSLSASVNFVDLAGSERASQTLSAGARLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQTRNTLLFASCAKEVSTNAQVNVVMSDKALVKQLQRELSRLENELRNSGTALLTSDAAALLREKDLQIEKLKREVTELTLQRDLAHSQIKDMLHVVGDDYSSLELESLEPQYPKLRVRSSLDFENHAEAPKLFGFHSKDSVGSFDASQYSDGHSFSSDDNLFQLPDLEKNFPRRNSSPPLTITVRSDWEQEKIEEQHPEILEDLCKEVRCIDSEDPITDRYIRSDMIDLSPNHYADSNVSSPRENTATTSGLIIDENRDNKDLGSSILKECKKMNSFRQLLAVPPLEKIFPIDSENNTPCSRRRLKLTRTKSCKASLMRNSSSDWFDKEEIIETTPPTGIEKEFTGRPEGIQRKSFTLNYNANAERQFGNGSENYRESADLESVKQLANHQVQETEAIMPAKNFKDVGLDPIQSDGETPSDWPSDFKKHQREIIQLWHECHVSLVHRTYFFLLFKGESSDSIYMEVELRRLSFLKDTFSRGDQTVEDGRTLTPSSSMRYLRRERQMLSKQMHRRMSRAERDNLYKKWGIKMNSKHRRLQLAHLLWNDTEDMNHIRESAAIVAKLVCTVEPDEALKEMFGLNFAPRQTSHRRKSFGWTVSMKLTL 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00827 932 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 702 930 - -
Bva08g00827 932 Pfam Domain of unknown function (DUF3490) 753 912 IPR021881 -
Bva08g00827 932 Pfam Kinesin motor domain 25 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00827 932 PANTHER CENTROMERE PROTEIN E 1 702 - -
Bva08g00827 932 SMART kinesin_4 17 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00827 932 Coils Coil 389 416 - -
Bva08g00827 932 Coils Coil 352 379 - -
Bva08g00827 932 ProSitePatterns Kinesin motor domain signature. 242 253 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva08g00827 932 PANTHER CENTROMERE PROTEIN E 702 930 - -
Bva08g00827 932 Gene3D Kinesin motor domain 12 374 IPR036961 -
Bva08g00827 932 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 1 702 - -
Bva08g00827 932 CDD KISc_CENP_E 20 343 - -
Bva08g00827 932 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00827 932 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00827 932 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00827 932 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00827 932 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 376 IPR027417 -
Bva08g00827 932 ProSiteProfiles Kinesin motor domain profile. 19 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00827 932 MobiDBLite consensus disorder prediction 561 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00827 Bva-Chr8 4252454 4259416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00827 17 373 Miscellaneous Gene Families AT5G06670 44.110 3.09e-82 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00827 K11498 - gmx:100802226 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00827 08 4252454 4259416 Bva11g01544 11 14566159 14572308 BWGD
Bva06g01943 06 13153168 13160115 Bva08g00827 08 4252454 4259416 ECH
Bva10g00879 10 6716863 6724335 Bva08g00827 08 4252454 4259416 ECH
Bva08g00827 08 4252454 4259416 Bva08g00827 08 4252454 4259416 ECH
Bva13g01774 13 14336901 14344264 Bva08g00827 08 4252454 4259416 ECH