Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01943 ATGAGAGATAGTGGATCGATGGAAGCAGAATCGAATGGGccagaagagaaaatttttgtttccattAGAGTAAGACCtttgaatgagaaagaaagagcaagGCACGATGTATCAGAGTGGGAATGCTTTGGCAACACCGTCAAACACAAGAACACCCCAATAGAACGATCATCGTTAATTGATGCCTATACATTTGACAGGGTATTTCACGAGGGCTGCTCCACAGAGCAGGTGTACAAGGAAGGGATCAAGGATGTTGCTCTTTCAGTTGTTCGTGGTATCAACTCAAGCATTTTTGCATATGGTCAAACAAGCAGTGGAAAGACATACACCATGACTGGAATTACTGAATATGCAGTAAGGGATATATATAGCTACATCGAGATGCATGAAGACAGAGAATTTGTTCTGAAGTTCTCTGCCATGGAGATCTATAATGAAGCGGTCATAGACCTTCTTGGTGAAGATACTTCCCCACTTAGACTTCTAGATGATCGAGAGAAAGGCACTGTTGTTGATAAACTTACAGAGGAGAGTTTAGAGGACTTGAGTCATTTGCAGGAACTCCTTTCTATATGTGCAGCTGAAAGGACAAATGAAGAGACATCCATGAATGAAACTAGTTCCAGATCTCATCAAATTCTTCGACTGACAGTGGAAAGTTATCCTCGCAATTATGCAGCCACTCATAGTTTTGGCGCTCTTGTAGCTAGCGTGAATTTTGTTGATCTTGCGGGAAGCGAGCGTGCTTCGCAGACATTATCAGCAGGTACAAGACTGAGAGAAGGCGGTCATATAAATCGTAGTTTACTGACCCTTGGAACTGTAATCCGCAAACTCAGCAAGGGAGGAAGTGGGCATGTACCTTACAGAGACTCTAAGCTAACTCGTATACTACATAACTCAATTGGAGGAAATGCCAGAACAGCTATCATTTGCACGATTTGTCCTGCACGAAGCCATGTTGAGCAATCAAGAAATACCCTATTGTTTGCTAGTTGTGCAAAACAAGTGACTACTAATGCTCATGTTAACGTAGTGATGTCAAACAAGGTTTTGGTAAATCAACTGCAACAAGAATTGGCTAGACTGGAGAACGAGTTGAGGAGCATTGCGCCTAAACTTGTGTTGCTTCAAGAGAGAGAACATCAGATCCAACAGATGGATAAGCAGATCAAAGAATTGACTCGGCAACGAGATATATTACAATCTCATGTAGATAACTTGCTCCTGTCAGTGAGAAAAGATGGGTTTTCAAGGGTCGATAAAGATTCAGGCTCAGAATCATCAGGTgttgttaataataatgttcATTCAGATAAGGTTCCCAGGATAGGCAGCATGTCTGAAAATGCCGACAAACCACGACTCAGTGTTTCTTTTTCCGACGAGCTACCTGAAATTTCTGAAGACAACTTTCTTTTAGATGGTAACACTCCCATGTTTGCTGGGCCCGATCCATGTCAAGGTTGGGAGGAGATTGCTAACAAAGCTTGTGCTGAATCTGAAGATAACCGCAAGGAAGTTGGTTGCATCAAAATGGAAGTAGTAAAAAGAGACGAACAAATAGATATTGATGCACCTGAAGAAAGCGAAGGAATATCCACAATTGAAGACGCGGAATCCTCTTTAATGAAGGGGGATAATGAGGTTTCCGCAGAAAATAACCAAGATGCTCTGCAGCAAAAGATTCAAGATCTGCAAAGGACCATTGAACGCCTCATTAGTCTCTCGGGGAAATGTCAATGTTCTTCTGAATCACATCTGCCTCGATCAAGAAGCTTACGATTTGCTAGAAGCAGAAGTTGCAAGCCAATTTTGTCTGCTACATCTTCTCCTCAGTTTGATAGGCtggacaaagaaaatatatctgGTCCTCAGTTGCATGAAATTCCACAGTTCCACAAGTTGGAGCAAAAAGCAGCCACACCTCTCCAGGTTTATAAGCTGGAGCTTGAAGATACTTCCTGTCCTCAGTTCGACAAGCTGGCCGCCACACCTTCCCGGCTTGATTGCCTGGAGTTTGGATATCCTTCACCTTCTCAGTTCGATAAGCTGGATCAAGAAATGGTCGCATCGCGTTCAAAGGACTATACTTTAAGTCCGGTAGACCTTCAAGACGAGCTTTCTCATCTGAAATCACTtgccaagaaaagaagatCATCCAGAAAATATTCTGAAACTACTTACGAGATGGATCCTTTCGATGAAGCAGAATCTGTCATGGGCTCTGATACGGAGGATACTGCTAGCGTCCTAAATTTTGTCGTAAAAATGAACGAAAGGGCCAAACCAACATTATTGAAGAAAGATTTTGACGATCTTGTGATACACGCAAAAGCATCTGGAACCGGTGCACGTGCGAACAGAACCAAAGGTGAAATTTCGGATTCTGCGTACTTGGACGTAGAGCTCAGACGTTTATCTTTCCTTAAGGACACATTTTCTGGCGGAACTACGTTTATGGAAGCAGGGAGTCCAAGTCTCACACCTATAGCAGAGGGTCAAAATCTCACCCCTCTAGCTGAGAGTCCAAATCTCACACCTGACTCACGCCTGAAGGCTCTCTATCGCGAGAGGAAAATGCTAAGCAAGCAactgcataaaaaatttagcagGAAGGAAAGGGAGGAACTTTACCAGAAGTGGCGTATTGATTTGAAAACAAACTATAGAAGTATGCAATTAGCATGGCGCCTGTGGACAGACACACAAGACATTATCCACGCGAGGGAAAGTGCAATGCTTGTTGCTAAACTAGTAGGTCTCGTGGGGTCAGATGAGTCCCCAAAGaagacatttggattcggatTCGGATTCTTTGGCAGACGCAAGAGCCATAAATCCCATGCTCAGAAGGACACATTGTCAATTTTGCTATCCAAGCCGGAGAAAGGGGCAAGTCCGTTGTTACACTG 2918 0.416 MRDSGSMEAESNGPEEKIFVSIRVRPLNEKERARHDVSEWECFGNTVKHKNTPIERSSLIDAYTFDRVFHEGCSTEQVYKEGIKDVALSVVRGINSSIFAYGQTSSGKTYTMTGITEYAVRDIYSYIEMHEDREFVLKFSAMEIYNEAVIDLLGEDTSPLRLLDDREKGTVVDKLTEESLEDLSHLQELLSICAAERTNEETSMNETSSRSHQILRLTVESYPRNYAATHSFGALVASVNFVDLAGSERASQTLSAGTRLREGGHINRSLLTLGTVIRKLSKGGSGHVPYRDSKLTRILHNSIGGNARTAIICTICPARSHVEQSRNTLLFASCAKQVTTNAHVNVVMSNKVLVNQLQQELARLENELRSIAPKLVLLQEREHQIQQMDKQIKELTRQRDILQSHVDNLLLSVRKDGFSRVDKDSGSESSGVVNNNVHSDKVPRIGSMSENADKPRLSVSFSDELPEISEDNFLLDGNTPMFAGPDPCQGWEEIANKACAESEDNRKEVGCIKMEVVKRDEQIDIDAPEESEGISTIEDAESSLMKGDNEVSAENNQDALQQKIQDLQRTIERLISLSGKCQCSSESHLPRSRSLRFARSRSCKPILSATSSPQFDRLDKENISGPQLHEIPQFHKLEQKAATPLQVYKLELEDTSCPQFDKLAATPSRLDCLEFGYPSPSQFDKLDQEMVASRSKDYTLSPVDLQDELSHLKSLAKKRRSSRKYSETTYEMDPFDEAESVMGSDTEDTASVLNFVVKMNERAKPTLLKKDFDDLVIHAKASGTGARANRTKGEISDSAYLDVELRRLSFLKDTFSGGTTFMEAGSPSLTPIAEGQNLTPLAESPNLTPDSRLKALYRERKMLSKQLHKKFSRKEREELYQKWRIDLKTNYRSMQLAWRLWTDTQDIIHARESAMLVAKLVGLVGSDESPKKTFGFGFGFFGRRKSHKSHAQKDTLSILLSKPEKGASPLLH 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01943 972 Pfam Kinesin motor domain 23 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01943 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 371 IPR027417 -
Bva06g01943 972 Coils Coil 378 405 - -
Bva06g01943 972 ProSiteProfiles Kinesin motor domain profile. 17 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01943 972 MobiDBLite consensus disorder prediction 419 451 - -
Bva06g01943 972 MobiDBLite consensus disorder prediction 424 442 - -
Bva06g01943 972 PANTHER KINESIN-LIKE PROTEIN KIN-7J 12 784 - -
Bva06g01943 972 PANTHER KINESIN-LIKE PROTEIN KIN-7J 792 954 - -
Bva06g01943 972 Gene3D Kinesin motor domain 8 369 IPR036961 -
Bva06g01943 972 Pfam Domain of unknown function (DUF3490) 792 938 IPR021881 -
Bva06g01943 972 SMART kinesin_4 15 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01943 972 CDD KISc_CENP_E 17 338 - -
Bva06g01943 972 ProSitePatterns Kinesin motor domain signature. 237 248 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva06g01943 972 Coils Coil 550 577 - -
Bva06g01943 972 PRINTS Kinesin heavy chain signature 238 256 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01943 972 PRINTS Kinesin heavy chain signature 202 219 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01943 972 PRINTS Kinesin heavy chain signature 288 309 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01943 972 PRINTS Kinesin heavy chain signature 93 114 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva06g01943 972 Coils Coil 347 374 - -
Bva06g01943 972 PANTHER CENTROMERE PROTEIN E 12 784 - -
Bva06g01943 972 PANTHER CENTROMERE PROTEIN E 792 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01943 Bva-Chr6 13153168 13160115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01943 15 507 Miscellaneous Gene Families AT5G06670 35.375 5.54e-73 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01943 K11498 - gmx:100802097 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01943 06 13153168 13160115 Bva08g00827 08 4252454 4259416 ECH
Bva06g01943 06 13153168 13160115 Bva06g01943 06 13153168 13160115 ECH