Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00879 ATGTCGCACTTGTGCGAGggatatgaaatgaaaatggctAGTTCTCCAGCTCgggagagaagaaagatgagAGATGGTGGGTCGATGGGAGGAGAAGCAAATGACAcggaagagaaaatttttgtttccattAGGGTAAGGTCTTTGAAcgagaaagaaagagcaagGAACGATGTATCAGAATGGGAATGCACTAATGGCAACACCATCAAATTCAAGAACACTCTAGCGGAACGATCATCAGCAACTGAAGTCTATACATTTGACAGGGTATTTGACGATGGCTGCTCCACAAAGCAGGTGTATAAGGAAACAATCAAGGAAGTCGCTCTTTCAGTTGTTAGTGGTATAAACTCTAGCATTTTTGCATATGGTCAAACAAGCAGTGGAAAGACATATACCATGACTGGAATTACAGAATATGCAGTAAGGGATATATATGACTACATCGAGAtgCAAGAAGACAGAGAATTTGTTCTGAAGTTCTCTGCCATGGAGATCTATAATGAAGCTGTCAGAGATCTTCTTGGTGTAGATACTGCCCCACTTAGACTTCTAGATGATCCGGAGAAAGGCACTGTTGTTGATAAACTTACAGAGGAGAGTTTAGAGGACTTGAGTCATTTGCAGGAACTCCTTACTATATGTGCAGCTGAAAGGACAACAGAAGAGACATCCATGAATGAAACAAGCTCCAGATCTCATCAAATTCTTAGACTTACAGTTGAAAGTTATCCTCGCAATTATGTAGGCATTGAAAGTTCTGGCACTCTTGTAGCTAGTGTGAATTTTGTTGATCTTGCGGGAAGTGAACGTGCTTCTCAAGCATTATCAGCAGGGGCAAGACTGAGAGAAGGTGGTCACATAAATCGCAGTTTACTGACCCTTGGAACTGTAATCCGCAAACTAAGcaaaggaaaaaatggGCATGTACCCTACAGAGACTCTAAGCTAACTCGTATCCTACAGAACTCATTAGGAGGAAATGCCAGAACAGCCATCATTTGCACCTTGAGTCCTGCACGTAGCCATGTTGAGCAATCAAGAAATACCCTATTCTTTGCTAGTTGTGCAAAACAGGTTACTACGAACGCTCAGGTTAACATGGTGACGTCAGACAAGGTTTTGGTAAATCGACTGCAACAAGAACTGGCTAGACTGGAGAACGAGTTGAGGAGCTTTGCACCTAAAACTGTCTTGCTTCAAGAGAGAGAACTTCAGATCGAACAGATGGATAAGGAGATCAAAGAATTGACTCGGCAACGTGATATATTCCAATCACGTGTTGTAAACTTGCTCCAGTCAGTTAGAAAAGATGGGTTTTCAAGGGCCTCAGAGTCATCAATTgttgttaataattttcattctgaCAAGGATACGACGAAAGGCAGCACATCTAGAAGTCCCAACAGACCACAACTTAGTGTATCTTTTTCCAATGAGCACTCAGAAACATCAGGTGTAGCTAATAGTGTTCATTCTGATAATGATCCACGGACAGGCAGCACATATAAAAGTCCTAACAGACCACAACTTAGTGTATCTTTTTCCAATGAGCACCATTTACAGCCACCCGAGACTGCTGAAGACAATTTGCTTTTAGATGGTAAGACTCCCAAGTTTGTTGGGCCTGATTCATGTCAAGGTTGCGAGGAGGTTGCTAACAGAGCTGATGCTGAATCTAAAGAAAACTGCAAGGAAGTTCGATTCATTGAAATGGAAATAGTAAAAAGAGACAAAGATATTGATGTGCCCAGACCTGCTTCTGAAGAAGTAACATTACCTGCGAAGCTAGACAGGGATGAAGATGCGAAACTCTCCTTAACGAAGGGGGATAACAACGTGAATCTTGTTGCCGGAGAAAATAGCCAAGCTGCTCTGCAGCAAAAGATTCAAGACCTACAAAGGACCATTGACCGTCTTGTTGGTTTAGCAGGGAAATCTCTTGGTTCTTCTGAATCAAATCTTCCTGGTTCAAGAAGCTTACAACTTGCTAGAAGCAGAAGCTGCAAGCCAATTTTGTCTGCTATATCTACTCCTCAGTTCGATAAGTTGGATCAAGAAACTATATCTTTTCTTCAATGGCAACAGCTGGagcatgaaattaaattatctcctCAGTTCGACAAGTTGGATCAAAAAGCTGCCACACCTTGCCCGGTCGATAAGTTGGGGCTTGAAGATACTTCCTGTCCTCAGTTCGACAAGCTGGACCATAAAGCTGCAACACCTCCCCGGGTGGATAACCTGTACCTTGAAGATACTTTACCTGCTCAGTTCGATAAGCTGGATCAGGAAACAATCACATCGCCTTCACTGTTGGAAAAGGAATATACGATGAGtccggttcactttgaagatGAAGACAAGCTTTCTGAGCTGAAATCACATgtcaagaaaagaagaacccgaaaatattctcaaactttCGAGATGGATCCAATAGGTGAAGCAGAATCTGTCATGGACTCTGATACGGAAGATACCGCTAGCGTCCTTAATTTTGTcgtaaaaatgaataaaagggGCAAACCAAAACCATCGAAGAAGGATTTTCATGATCTTGTGGTAAACACAAGGGCATCTGAAACCGGTGAACGTATGAACAACGCCACAGGTATCAGCTTCCCTGGAATGGCAGGTGTTTTCCAACCTTACGGATTTGAGAGGCAGCAAAGAGATATAATTGAACTCTGGGATAGGTGCAATGTACCACTGGTTCATAGATCgtattttttccttctcatcaAAGGCGAACTTTCGGATTCTGTGTACTTGGACGTAGAGCTCAGACGTTTATCTTTCCTTGAGTACAAATTTTCTAGTGGAACTAAGTGGGAAGCAGACGGTCCGAATCTCACACCAAACTCAAGtATGAAGGCTCTCAATCACGAGAGGAAAATGCTAAGCAAACAAGTGCATAAAAAGTTTGGCAAGAAGGAAAGAGACGAACTTTACCAGAACTGGGGAATTGATTTGAAGACAAAGCATAGAAGTATACAATTAGCATGGCGCCTGTGGACAGATACAAAAGACATGATCCACGCGAGGGAAAGTGCAATGCTTGTTGCTAAACTAGTTGGTCTTGTGGGGTCAGATGTGTCCCCAAAGaagacatttggattcggctTCTTCGGAAAACGCAAGAGCCAGAAATTCCAAACTTGGAAGGACACAGTGTCAACTTTGTTATTATA 3197 0.3951 MSHLCEGYEMKMASSPARERRKMRDGGSMGGEANDTEEKIFVSIRVRSLNEKERARNDVSEWECTNGNTIKFKNTLAERSSATEVYTFDRVFDDGCSTKQVYKETIKEVALSVVSGINSSIFAYGQTSSGKTYTMTGITEYAVRDIYDYIEMQEDREFVLKFSAMEIYNEAVRDLLGVDTAPLRLLDDPEKGTVVDKLTEESLEDLSHLQELLTICAAERTTEETSMNETSSRSHQILRLTVESYPRNYVGIESSGTLVASVNFVDLAGSERASQALSAGARLREGGHINRSLLTLGTVIRKLSKGKNGHVPYRDSKLTRILQNSLGGNARTAIICTLSPARSHVEQSRNTLFFASCAKQVTTNAQVNMVTSDKVLVNRLQQELARLENELRSFAPKTVLLQERELQIEQMDKEIKELTRQRDIFQSRVVNLLQSVRKDGFSRASESSIVVNNFHSDKDTTKGSTSRSPNRPQLSVSFSNEHSETSGVANSVHSDNDPRTGSTYKSPNRPQLSVSFSNEHHLQPPETAEDNLLLDGKTPKFVGPDSCQGCEEVANRADAESKENCKEVRFIEMEIVKRDKDIDVPRPASEEVTLPAKLDRDEDAKLSLTKGDNNVNLVAGENSQAALQQKIQDLQRTIDRLVGLAGKSLGSSESNLPGSRSLQLARSRSCKPILSAISTPQFDKLDQETISFLQWQQLEHEIKLSPQFDKLDQKAATPCPVDKLGLEDTSCPQFDKLDHKAATPPRVDNLYLEDTLPAQFDKLDQETITSPSLLEKEYTMSPVHFEDEDKLSELKSHVKKRRTRKYSQTFEMDPIGEAESVMDSDTEDTASVLNFVVKMNKRGKPKPSKKDFHDLVVNTRASETGERMNNATGISFPGMAGVFQPYGFERQQRDIIELWDRCNVPLVHRSYFFLLIKGELSDSVYLDVELRRLSFLEYKFSSGTKWEADGPNLTPNSSMKALNHERKMLSKQVHKKFGKKERDELYQNWGIDLKTKHRSIQLAWRLWTDTKDMIHARESAMLVAKLVGLVGSDVSPKKTFGFGFFGKRKSQKFQTWKDTVSTLLL 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00879 1065 Coils Coil 370 397 - -
Bva10g00879 1065 SMART kinesin_4 37 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00879 1065 MobiDBLite consensus disorder prediction 13 32 - -
Bva10g00879 1065 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva10g00879 1065 MobiDBLite consensus disorder prediction 10 32 - -
Bva10g00879 1065 PRINTS Kinesin heavy chain signature 311 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00879 1065 PRINTS Kinesin heavy chain signature 225 242 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00879 1065 PRINTS Kinesin heavy chain signature 116 137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00879 1065 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00879 1065 MobiDBLite consensus disorder prediction 454 525 - -
Bva10g00879 1065 Pfam Kinesin motor domain 45 361 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00879 1065 MobiDBLite consensus disorder prediction 454 522 - -
Bva10g00879 1065 CDD KISc_CENP_E 39 361 - -
Bva10g00879 1065 Coils Coil 401 428 - -
Bva10g00879 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 393 IPR027417 -
Bva10g00879 1065 Gene3D Kinesin motor domain 30 392 IPR036961 -
Bva10g00879 1065 PANTHER KINESIN-LIKE PROTEIN KIN-7J 34 1062 - -
Bva10g00879 1065 Pfam Domain of unknown function (DUF3490) 888 1044 IPR021881 -
Bva10g00879 1065 ProSiteProfiles Kinesin motor domain profile. 39 361 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00879 1065 Coils Coil 617 644 - -
Bva10g00879 1065 PANTHER CENTROMERE PROTEIN E 34 1062 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00879 Bva-Chr10 6716863 6724335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00879 36 424 Miscellaneous Gene Families AT5G06670 38.287 1.87e-71 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00879 K11498 - gmx:100802097 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00879 10 6716863 6724335 Bva08g00827 08 4252454 4259416 ECH
Bva10g00879 10 6716863 6724335 Bva10g00879 10 6716863 6724335 ECH