Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00742 ATGGTGAGGCGAACTCGATCTCAAACTAACGCCACTTCAAGCTCCGAAGCTCATGCCCTGGATCCACAATCGTTGATCGCCACTGATATTTCCTTAAATCCTTCTTCCAAAATCTCATTTCGGGCTCGGAAAATTCGAAGAGTCACCTCTGAGACAGCAAAGAGAAAAGACCCCCAAACTCTCAAGGCAGAATCTTCATTACCGCCCGAAGACAAAACCATAAACTTGGAGGAGGAAAACCCTTCAGTATCACCCTCCGTTTTGCCCATGAATGTCAAGCCATTGACGTCCCCAGGCGAACTGCAGCTGTCTCTTCAGCATCTGCGTAAAGCCGATTCTCTCCTAAAGATATGCATTGATTCTTTTCGCCCTATAGAGTTCATTACTCATCGACCACCATTCCTATCTCTCACAAAGAGCATCATCTGCCAGCAACTTTCTAACAAGGCAGCTAAATCGATCCACGACCGTTTTGTCTCCCTTTGTGGCGGCGAGGCTTCAGTTATTCCTGACGCAGTGCTTGGACTCTCTGCCCAGCAGCTCCGGCAAGCTGGAATCTCTGGGCAGAAAGCAAGTTATATTCATGACCTGGCCAGCAAATACGTAGATGGCACGTTATCGGATTCCTCGATACTTGAAATGGACGATGAAACCCTCTTTACTAAGCTTACTATGGTTAAGGGTATTGGGCCTTGGTCAGTGCACATGTTCATGATATTCACGCTTCACAGGCCAGATGTTCTCCCTGTCGGGGATTTGGTTGTTAAGAGAGGCGTTCAGCGGTTGTACGGCCTAAAAGCATTGCCACAGGCCTCGCAAGTGGAGAAATTGTGCGAAAAGTGGAAGCCATATAGGTCTGTTGGGTCCTGGTATATGTATAGGTTAATGGAAGCCAAAGGGGTCCTACCAACGGCGGCATTAGGAGCAGTTGCTGCAGCATCCGTGGTTGTGGATGATACCGTACAAGAGTA 971 0.482 MVRRTRSQTNATSSSEAHALDPQSLIATDISLNPSSKISFRARKIRRVTSETAKRKDPQTLKAESSLPPEDKTINLEEENPSVSPSVLPMNVKPLTSPGELQLSLQHLRKADSLLKICIDSFRPIEFITHRPPFLSLTKSIICQQLSNKAAKSIHDRFVSLCGGEASVIPDAVLGLSAQQLRQAGISGQKASYIHDLASKYVDGTLSDSSILEMDDETLFTKLTMVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVKRGVQRLYGLKALPQASQVEKLCEKWKPYRSVGSWYMYRLMEAKGVLPTAALGAVAAASVVVDDTVQE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00742 323 MobiDBLite consensus disorder prediction 1 24 - -
Bva08g00742 323 Pfam HhH-GPD superfamily base excision DNA repair protein 139 282 IPR003265 GO:0006284
Bva08g00742 323 MobiDBLite consensus disorder prediction 47 86 - -
Bva08g00742 323 Gene3D - 106 294 - -
Bva08g00742 323 SMART endo3end 142 297 IPR003265 GO:0006284
Bva08g00742 323 MobiDBLite consensus disorder prediction 47 61 - -
Bva08g00742 323 PANTHER HHH-GPD BASE EXCISION DNA REPAIR FAMILY PROTEIN 4 304 - -
Bva08g00742 323 CDD ENDO3c 134 295 IPR003265 GO:0006284
Bva08g00742 323 SUPERFAMILY DNA-glycosylase 122 295 IPR011257 GO:0003824|GO:0006281
Bva08g00742 323 Gene3D Hypothetical protein; domain 2 131 244 - -
Bva08g00742 323 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 4 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00742 Bva-Chr8 3850161 3851305 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00742 K01247 - jre:109005513 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01998 06 13411269 13414882 Bva08g00742 08 3850161 3851305 ECH
Bva10g00821 10 6432486 6436070 Bva08g00742 08 3850161 3851305 ECH
Bva08g00742 08 3850161 3851305 Bva08g00742 08 3850161 3851305 ECH