Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00821 ATGGGCGAGCAAAGCCAAGGTCAAGGACAAACCCACATCCAAACCCGAACCCAGTCTCAGCCTCACCAGGATTCCTCCACCATTATCACATCCAATGCTGCTACCACTTCGACTACCGTTGCCACCGCCACCATTACTCATGCTGCGCCGATAGACTCCCAACTAAGCAATGCTCCTTCACAAACCAATTCTCCGCCTTCCAAAATCCCCTTCCGCCCCCGAAAGATCCGGAAACTCTCCCCGGACCCGAACAACTCTCAAATCATCGCCGTGGAAACCCCAAAAGCTACACCGACCACCACCTCCACTTCCAAGGCTAGTGGCCGGAACAACAAAATTGTCCAACAGCGAGCTGCAATGGTCCCTAGAGTCGTGGCTAGGTCACTCTCGTGTGAAGGCGAGGTTGAAATCGCTCTGCGCTTCCTCCGCAACGCCGATCCACTCCTCGCTTCTTTAATTGACATTCACCAACCCCCGACCTTCGATAATTTTCACACCCCCTTCCTTGCACTAACACGTAGTATTTTGTATCAGCAACTCGCTTATAAAGCTGGTACTTCGATCTATACCCGCTTCATCGCTCTATGTGGAGGCGAGGCAGGGGTTCTGCCAGAGACCGTTCTTGCCCTAACTCCTCAACAACTTCGCCAAATTGGGGTTTCAGGCCGAAAAGCTAGTTATCTCCATGACTTAGCCAGAAAGTACCAGAATGGGATTTTATCAGATTCAGCCATTGTAAATATGGATGATAAATCTCTTTTCACGATGCTCACTATGGTTAATGGAATTGGATCATGGTCTGTTCATATGTTCATGATCTTCTCTCTGCATAGACCTGATGTTCTTCCAATCAACGATCTCGGTGTTCGCAAAGGGGTTCAGCTGCTTTACAATCTCGAAGAGTTGCCTCGACCGTCACAGATGGATCTATTGTGTGAAAAATGGAGGCCTTACAGATCAGTTGCGTCATGGTATATGTGGAGATTTGTAGAAGCCAAGGGAACTCCTTCAAGTGCCGTGGCTGTGGCTACTGGTGCTAGCTTGCAGCAGCACCAGCAGGAccagcaacagcagcagcacACTCAGCAGCCACAGCTTCTCGATGCCATGAATGGCATGTTTAATCTCGGGGCGGCCTGCGCTTGGGGACAATG 1154 0.4931 MGEQSQGQGQTHIQTRTQSQPHQDSSTIITSNAATTSTTVATATITHAAPIDSQLSNAPSQTNSPPSKIPFRPRKIRKLSPDPNNSQIIAVETPKATPTTTSTSKASGRNNKIVQQRAAMVPRVVARSLSCEGEVEIALRFLRNADPLLASLIDIHQPPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFIALCGGEAGVLPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEELPRPSQMDLLCEKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGASLQQHQQDQQQQQHTQQPQLLDAMNGMFNLGAACAWGQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00821 384 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 1 378 - -
Bva10g00821 384 PANTHER BNAC05G15000D PROTEIN 1 378 - -
Bva10g00821 384 Gene3D - 141 328 - -
Bva10g00821 384 CDD ENDO3c 168 329 IPR003265 GO:0006284
Bva10g00821 384 Gene3D Hypothetical protein; domain 2 165 278 - -
Bva10g00821 384 MobiDBLite consensus disorder prediction 48 109 - -
Bva10g00821 384 MobiDBLite consensus disorder prediction 80 109 - -
Bva10g00821 384 SUPERFAMILY DNA-glycosylase 157 329 IPR011257 GO:0003824|GO:0006281
Bva10g00821 384 SMART endo3end 176 331 IPR003265 GO:0006284
Bva10g00821 384 MobiDBLite consensus disorder prediction 48 68 - -
Bva10g00821 384 MobiDBLite consensus disorder prediction 1 34 - -
Bva10g00821 384 Pfam HhH-GPD superfamily base excision DNA repair protein 173 316 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00821 Bva-Chr10 6432486 6436070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00821 K01247 - zju:107420276 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00821 10 6432486 6436070 Bva08g00742 08 3850161 3851305 ECH
Bva10g00821 10 6432486 6436070 Bva10g00821 10 6432486 6436070 ECH