Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01998 ATGGGCGAGCAAACCCAAGGTCAAGGACAAACCCACGTCCAAAACCGAACCCAGTCCCAGCCTCGCCAGGATTCCTCCACCAGTATTACATCCAGTACCACCACCACTTCGACCACCGTTGCCACCGCTACCATTACTCATGTTACGGCAATAGACTCCAAACTAAGCAATGCTCCCTCACAAACCAATTCTCCGCTTTCCAAAATCCCCTTCCGTCCCCCAAAGATCCGGAAAATCTCTCCGGACCCAAATAACTCTCAAATCGTCGCCGTGGAAACCCCGAAAGCTACCTCGATGACCACATCAGCCGTCAAAGCTAGTGGTCGGAACAACAAGATTGTCCAACAACGAGCGGCCATGGTCCCTAGAGTGGTGGCCAGGTCACTCTCGTGTGAAGGCGAGGTCGAAATCGCTCTGCGCTTCCTCCGCAACGCCGATCCACTCCTCGCTTCTTTAATTGACCTTCACCAACCCCCTACCTTCGATAATTTCCACACCCCCTTCCTTGCTCTAACACGTAGCATTTTGTATCAGCAACTCGCTTATAAAGCTGGTACTTCGATCTATACCCGCTTCATCGCTCTATGTGGAGGCGAGGCAGGGGTTCTACCAGAAACCGTTCTTGCTCTATCTCCTCAACAACTTCGGCAAATTGGGGTTTCAGGCCGAAAAGCTAGTTATCTCCATGACTTGGCCAGAAAGTACCAGAATGGGATTTTGTCAGATTCGGCGATTGTAAATATGGATGACAAATCTCTTTTCACGATGCTCACTATGGTTAATGGAATTGGGTCTTGGTCTGTTCATATGTTCATGATCTTCTCTCTCCATAGACCTGATGTTCTTCCAATCAACGATCTTGGTGTTCGCAAAGGGGTTCAGCTGCTTTACAACCTCGAAGAGTTGCCTCGACCGTCACAGATGGACCAAATGTGTGAAAAGTGGAGGCCTTACCGGTCCGTTGCGTCATGGTATATGTGGAGATTTGTAGAAGCAAAGGGAACTCCTTCAAGTGCCGTGGCTGTGGCTACTGGTGCTAGCTTGCAGCAGCCCCAGCAGGAccagcaacagcagcagcaccCTCCGCAGCCACAGCTTCTCGATCCCATTAATGGCATGTTCAATCTCGGGGCCGCGGCCTGTGCTTGGGGTCAGTG 1157 0.5004 MGEQTQGQGQTHVQNRTQSQPRQDSSTSITSSTTTTSTTVATATITHVTAIDSKLSNAPSQTNSPLSKIPFRPPKIRKISPDPNNSQIVAVETPKATSMTTSAVKASGRNNKIVQQRAAMVPRVVARSLSCEGEVEIALRFLRNADPLLASLIDLHQPPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFIALCGGEAGVLPETVLALSPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEELPRPSQMDQMCEKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGASLQQPQQDQQQQQHPPQPQLLDPINGMFNLGAAACAWGQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01998 385 MobiDBLite consensus disorder prediction 1 40 - -
Bva06g01998 385 SMART endo3end 176 331 IPR003265 GO:0006284
Bva06g01998 385 Pfam HhH-GPD superfamily base excision DNA repair protein 173 316 IPR003265 GO:0006284
Bva06g01998 385 CDD ENDO3c 168 329 IPR003265 GO:0006284
Bva06g01998 385 Gene3D - 141 328 - -
Bva06g01998 385 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 1 379 - -
Bva06g01998 385 PANTHER BNAC05G15000D PROTEIN 1 379 - -
Bva06g01998 385 MobiDBLite consensus disorder prediction 345 365 - -
Bva06g01998 385 MobiDBLite consensus disorder prediction 55 87 - -
Bva06g01998 385 Gene3D Hypothetical protein; domain 2 165 278 - -
Bva06g01998 385 SUPERFAMILY DNA-glycosylase 157 329 IPR011257 GO:0003824|GO:0006281
Bva06g01998 385 MobiDBLite consensus disorder prediction 345 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01998 Bva-Chr6 13411269 13414882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01998 K01247 - gmx:100790760 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01998 06 13411269 13414882 Bva08g00742 08 3850161 3851305 ECH
Bva06g01998 06 13411269 13414882 Bva06g01998 06 13411269 13414882 ECH