Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00197 ATGAAGTATATCTGTATCTTGCTTTCTACTGCTGCCTTTTTGTTTGAGTTGGGCTATGCTGCCAGATTTGATGTTCGTAACAAGTGCCCGTATACAGTGTGGGCAGCAGCTGTGCCGGGAGGTGGCAAGAGGTTGAATCGAGGCGAAACGTGGACTTTTAATGTCAGCCCCGGCACCAAGCAAGCTCGCATCTGGGCTCGAACCCATTGCACTTTTGACAGGTCTGGGCGTGGAAGATGTCAGACCGGCGATTGCGGTGGTGACCTCGAGTGCAAAGGCTACGGAGCACCGCCAAATACCCTGGCTGAGTATGGCTTGAACCAGTACAATAACCTGgatttctttgatatatctCTCGTTGATGGCTTCAATGTTCCTATGGAATTTAGTCCCACCTCCAGAGGGTGCCGAGGCATAAAATGCGCCTCCAATATCAACGGTCAATGCCCTAGAGAGCTCAAGGCTGCTGCTGGTTGTAACAATCCGTGTACTGTGTTCAAAACCGATCAGTATTGTTGCAAATCTGGAAATTGTGGGCCCACCAATTATTCCAGGTTTTTCAAGAATCGGTGCCCTGATGCTTGCAGTTACCCGGAGGATGATGCCACCAGCACCTTTACGTGCCCTAGTGGAACTGGCTACACAGTTGTGTTTTGTCCTTG 662 0.4924 MKYICILLSTAAFLFELGYAARFDVRNKCPYTVWAAAVPGGGKRLNRGETWTFNVSPGTKQARIWARTHCTFDRSGRGRCQTGDCGGDLECKGYGAPPNTLAEYGLNQYNNLDFFDISLVDGFNVPMEFSPTSRGCRGIKCASNINGQCPRELKAAAGCNNPCTVFKTDQYCCKSGNCGPTNYSRFFKNRCPDACSYPEDDATSTFTCPSGTGYTVVFCP 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00197 220 ProSitePatterns Thaumatin family signature. 76 91 IPR017949 -
Bva08g00197 220 PANTHER THAUMATIN-LIKE PROTEIN 8 220 - -
Bva08g00197 220 SUPERFAMILY Osmotin, thaumatin-like protein 21 220 IPR037176 -
Bva08g00197 220 Pfam Thaumatin family 27 220 IPR001938 -
Bva08g00197 220 SMART tha2 23 220 IPR001938 -
Bva08g00197 220 CDD TLP-P 23 220 - -
Bva08g00197 220 PANTHER OS03G0233200 PROTEIN 8 220 IPR001938 -
Bva08g00197 220 PIRSF PR5 1 220 IPR001938 -
Bva08g00197 220 ProSiteProfiles Thaumatin family profile. 20 220 IPR001938 -
Bva08g00197 220 Gene3D Thaumatin 20 220 IPR037176 -
Bva08g00197 220 PRINTS Pathogenesis-related protein signature 210 219 IPR001938 -
Bva08g00197 220 PRINTS Pathogenesis-related protein signature 41 50 IPR001938 -
Bva08g00197 220 PRINTS Pathogenesis-related protein signature 22 34 IPR001938 -
Bva08g00197 220 PRINTS Pathogenesis-related protein signature 63 74 IPR001938 -
Bva08g00197 220 PRINTS Pathogenesis-related protein signature 76 105 IPR001938 -
Bva08g00197 220 PRINTS Pathogenesis-related protein signature 113 129 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00197 Bva-Chr8 964879 965541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00197 4 220 Receptor kinase-like Gene Family AT5G38280 36.327 5.48e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00197 - - mnt:21412340 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00197 08 964879 965541 Bva08g00198 08 967457 968369 BWGD
Bva08g00195 08 958638 959434 Bva08g00197 08 964879 965541 BWGD
Bva08g00197 08 964879 965541 Bva08g00197 08 964879 965541 ECH