Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00195 ATGTCCTTCCTTGTAATAATCGCTCTCTGCCTCACTTTTGCATTCACCCAAGCAGCAAGATTCGATGTCACAAACAGTTGCACCGACACTGTATGGGCTGCAGCCGTGCCTGGAGGAGGCCGGCAGCTCAACTCCGGCGAGACATGGTCATTTGACGTGGCTGCCGGCACTACAGGGGCTCGCATTTGGGCTCGAACTGGTTGCAGCTTTGATGGATCCGGGCACGGCCGATGTGATACCGGTGACTGTGGGGGTCTGCTAGAGTGCCAAGCATATGGTACACCTCCAAATACCCTCGCTGAATATGCACTAAACCAGTACAACAATTTGGACTTCTTCGATATATCACTCGTTGACGGTTTTAACGTTGCAATGGAATTTAGTCCAACATCTAATGGTTGCACCCGAGGCATAACATGCAACGCCGATATCAACGGACAATGTCCCAGTGAGTTGAAGACACAAGGAGGTTGCAACAATCCATGTACTGTGTTCAAAACAGATCAATACTGCTGCAATTCAGGAAGTTGTGGACCTACCGATTACTCCAAATTCTTCAAGGATAGGTGCCCTGATGCTTATAGTTACCCTAAGGATGATCAAACTAGCACATTCACTTGCCCAACAGGAACCAACTATAAGGTTGTATTTTGCCCTTG 659 0.4841 MSFLVIIALCLTFAFTQAARFDVTNSCTDTVWAAAVPGGGRQLNSGETWSFDVAAGTTGARIWARTGCSFDGSGHGRCDTGDCGGLLECQAYGTPPNTLAEYALNQYNNLDFFDISLVDGFNVAMEFSPTSNGCTRGITCNADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSKFFKDRCPDAYSYPKDDQTSTFTCPTGTNYKVVFCP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00195 219 Pfam Thaumatin family 25 219 IPR001938 -
Bva08g00195 219 PRINTS Pathogenesis-related protein signature 61 72 IPR001938 -
Bva08g00195 219 PRINTS Pathogenesis-related protein signature 20 32 IPR001938 -
Bva08g00195 219 PRINTS Pathogenesis-related protein signature 111 127 IPR001938 -
Bva08g00195 219 PRINTS Pathogenesis-related protein signature 209 218 IPR001938 -
Bva08g00195 219 PRINTS Pathogenesis-related protein signature 39 48 IPR001938 -
Bva08g00195 219 PRINTS Pathogenesis-related protein signature 74 103 IPR001938 -
Bva08g00195 219 SUPERFAMILY Osmotin, thaumatin-like protein 19 219 IPR037176 -
Bva08g00195 219 PIRSF PR5 1 219 IPR001938 -
Bva08g00195 219 PANTHER THAUMATIN-RELATED 5 219 - -
Bva08g00195 219 Gene3D Thaumatin 19 219 IPR037176 -
Bva08g00195 219 SMART tha2 21 219 IPR001938 -
Bva08g00195 219 PANTHER OS03G0233200 PROTEIN 5 219 IPR001938 -
Bva08g00195 219 ProSiteProfiles Thaumatin family profile. 18 219 IPR001938 -
Bva08g00195 219 ProSitePatterns Thaumatin family signature. 74 89 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00195 Bva-Chr8 958638 959434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00195 1 219 Receptor kinase-like Gene Family AT5G38280 34.286 2.58e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00195 - - gmx:100301882 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00195 08 958638 959434 Bva08g00197 08 964879 965541 BWGD
Bva08g00195 08 958638 959434 Bva08g00195 08 958638 959434 ECH