Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00198 ATGCACAACACTAAGCACATCTGTATCTTGCTTTCCGCTGCTATCTTGTTGTTTGGTTTGGGCTACGCAACCAGGTTTGATGTTCGTAACCAGTGTCCGTATACAGTGTGGGCAGCAGCTGTGCCAGGAGGTGGCAAGAGGTTGAATCAAGGAGAAACGTGGACTTTCAATGTCAACCCCGGTACGATGCAAGGTCGCATCTGGGGTCGAACCCATTGCAGCTTTGACGAATCTGGGCGTGGGAGATGTGAGACCGGTGATTGTGGTGGTGTCCTCGAGTGCGAAAGCCATGGTGCACCACCAAATACCCAGGCTGAGTATGGCTTGAACCTGTACAACAACCTGGATTTCTTCGATATCTCTCTCGTTGGTGGCTTCAATGTCCCTATGGAATTTAGTCCCACCTCCATACGGTGCCGAGGGACAAGATGCGCCGGCGATATCAACAGTAAATGTCCTGGAGAGCTCAAGACTGCCGGTGGTTGTTACAATCCATGTACAGTGTTCAAAACTGACCAGTATTGTTGCTATTCTGGGCATTGTGGGCCCACCAGTTATTCGGAGTTCTTCAAGAAGCGCTGTCCGGAAGCTTGCTGTTACCCCGCGGATGTAGCCACCAGCACCTTCACGTGCCCCAGTGGGACTGCCTACACACTTGTGTTTTGTCCTTG 671 0.5156 MHNTKHICILLSAAILLFGLGYATRFDVRNQCPYTVWAAAVPGGGKRLNQGETWTFNVNPGTMQGRIWGRTHCSFDESGRGRCETGDCGGVLECESHGAPPNTQAEYGLNLYNNLDFFDISLVGGFNVPMEFSPTSIRCRGTRCAGDINSKCPGELKTAGGCYNPCTVFKTDQYCCYSGHCGPTSYSEFFKKRCPEACCYPADVATSTFTCPSGTAYTLVFCP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00198 223 Gene3D Thaumatin 23 223 IPR037176 -
Bva08g00198 223 SMART tha2 26 223 IPR001938 -
Bva08g00198 223 PIRSF PR5 1 223 IPR001938 -
Bva08g00198 223 PANTHER OS03G0233200 PROTEIN 8 223 IPR001938 -
Bva08g00198 223 ProSiteProfiles Thaumatin family profile. 23 223 IPR001938 -
Bva08g00198 223 ProSitePatterns Thaumatin family signature. 79 94 IPR017949 -
Bva08g00198 223 PANTHER THAUMATIN-LIKE PROTEIN 8 223 - -
Bva08g00198 223 Pfam Thaumatin family 30 223 IPR001938 -
Bva08g00198 223 PRINTS Pathogenesis-related protein signature 66 77 IPR001938 -
Bva08g00198 223 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Bva08g00198 223 PRINTS Pathogenesis-related protein signature 44 53 IPR001938 -
Bva08g00198 223 PRINTS Pathogenesis-related protein signature 116 132 IPR001938 -
Bva08g00198 223 PRINTS Pathogenesis-related protein signature 79 108 IPR001938 -
Bva08g00198 223 PRINTS Pathogenesis-related protein signature 213 222 IPR001938 -
Bva08g00198 223 SUPERFAMILY Osmotin, thaumatin-like protein 24 223 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00198 Bva-Chr8 967457 968369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00198 11 223 Receptor kinase-like Gene Family AT5G38280 36.735 1.62e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00198 - - mus:103989579 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00197 08 964879 965541 Bva08g00198 08 967457 968369 BWGD
Bva08g00198 08 967457 968369 Bva08g00198 08 967457 968369 ECH