Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01271 ATgcaaggagaagaagaaagggtgCCTGCAGAAAATGAGcagaaaggaaaattcaaaagaatatgTGTCTTCTGTGGAAGCAGAGCTGGATGCAAGTCTGCATTTGCTGATGCAGCTCTTGAGCTTGGAAAGTTGCTGGTTCAGAAACAGATTGGTTTGGTTTATGGTGGAGGAAGCTTAGGACTAATGGGTTTGATATCTAAGACTGTGCAAAATGGGGGCTGTCATGTTCTTGGAGTGATTCCTAATGCTCTGTTGCCTCCTGAGATATCAGGAGAATCCTTTGGAGAAGTGAAAACAGTTGCTGATATGCATGAAAGGAAGGCAGAAATGGCCAAACATGCTGATGCATTCATAGCACTTCCCgGAGGATATGGAACCATGGAGGAACTTCTGGAGGTGATAGCATGGTCTCAGCTTGGAATACATGATAAACCAGTGGGATTGTTGAACGTTGATGGGTATTTCAATAGCTTGCTGGCCTTATTTGACAAGGGAGTGGAAGAGGGTTTCATTGATGGCTCGGCAAGACATATTGTGGTAATAGCAGACACAGCAGAAGAACTCATAAAGAAAATGGAGgAGTATGTTCCCCTTCATGACAAGGTTGCGCCCAGACAACGTTGGGAAGTGGACCAATTATTAGAATCTACTTCAAGTGATGAACCCCAAAAATCTTA 680 0.4074 MQGEEERVPAENEQKGKFKRICVFCGSRAGCKSAFADAALELGKLLVQKQIGLVYGGGSLGLMGLISKTVQNGGCHVLGVIPNALLPPEISGESFGEVKTVADMHERKAEMAKHADAFIALPGGYGTMEELLEVIAWSQLGIHDKPVGLLNVDGYFNSLLALFDKGVEEGFIDGSARHIVVIADTAEELIKKMEEYVPLHDKVAPRQRWEVDQLLESTSSDEPQKS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01271 226 Gene3D - 7 195 - -
Bva07g01271 226 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG4-RELATED 10 215 - -
Bva07g01271 226 SUPERFAMILY MCP/YpsA-like 18 196 - -
Bva07g01271 226 Pfam Possible lysine decarboxylase 63 193 IPR031100 -
Bva07g01271 226 PANTHER LOG FAMILY PROTEIN YJL055W 10 215 - -
Bva07g01271 226 TIGRFAM TIGR00730: TIGR00730 family protein 19 196 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01271 Bva-Chr7 13516123 13518113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01271 K22522 - mnt:21395714 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01271 07 13516123 13518113 Bva09g01296 09 7031494 7033056 ECH
Bva04g02572 04 23035813 23039929 Bva07g01271 07 13516123 13518113 ECH
Bva13g01959 13 15772873 15776712 Bva07g01271 07 13516123 13518113 ECH
Bva07g01271 07 13516123 13518113 Bva07g01271 07 13516123 13518113 ECH