Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02572 ATGGCAATGGAGCTGGAGAGTGAGATAAGGCAGTCAAAGTTTAAGAGGATTTGTGTGTTCTGTGGGAGTAGCCAAGGCAAGAAGAGTAGCTATCAAGATGCTGCTATTGAACTTGGCAAGGAATTGGTTTCAAGGAACATTGATCTGGTTTATGGAGGTGGAAGCATTGGTCTAATGGGTTTAGTTTCACAAGCTGTTCATGATGGCGGTGGGCATGTGATTGGAGTTATTCCCAAGACGCTCATGCCTCGAGAGCTAACTGGTGAAACAGTGGGAGAAGTGAAGGCAGTAGCAGATATGCACCAAAGGAAAGCAGAGATGGCTAAGCACTCCGATGCTTTTATTGCCTTACCAGGAGGTTATGGGACTCTGGAAGAACTCCTTGAAGCCATAACATGGGCTCAACTTGGCATCCATGACAAGCCGGTGGGGTTACTGAATGTTGATGGATACTACAATTCCTTGCTGTCATTCATTGACAAAGCTGTAGAAGAGGGATTCATTAATCCAAGTGCCCGCCACATAATTGTATCTGCACCAACCGCAAAAGAGTTAGTGAAGAAATTGGAGGAATATGTCCCATGTCATGAAAGTGTTGCTCCCAAGTTATGCTGGGAAATGGAACAGCTTGGTTATCCTCACCAATATGACAACATCTCGAGGTA 665 0.4511 MAMELESEIRQSKFKRICVFCGSSQGKKSSYQDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGGHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEAITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFINPSARHIIVSAPTAKELVKKLEEYVPCHESVAPKLCWEMEQLGYPHQYDNISR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02572 221 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG6-RELATED 3 217 - -
Bva04g02572 221 PANTHER LOG FAMILY PROTEIN YJL055W 3 217 - -
Bva04g02572 221 SUPERFAMILY MCP/YpsA-like 13 192 - -
Bva04g02572 221 Pfam Possible lysine decarboxylase 59 189 IPR031100 -
Bva04g02572 221 Gene3D - 5 191 - -
Bva04g02572 221 TIGRFAM TIGR00730: TIGR00730 family protein 15 192 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02572 Bva-Chr4 23035813 23039929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02572 K22522 - cpap:110811265 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02572 04 23035813 23039929 Bva07g01271 07 13516123 13518113 ECH
Bva04g02572 04 23035813 23039929 Bva09g01296 09 7031494 7033056 ECH
Bva04g02572 04 23035813 23039929 Bva04g02572 04 23035813 23039929 ECH