Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01959 ATGGAGCTAGAGAGTGAGATAAGACTGTCAAAGTTTAAGAGGATTTGTGTATTCTGTGGGAGTAGCCAGGGCAAGAAGAGTAGCTATCAGGATGCTGCTATAGAACTTGGCAAGGAATTGGTTTCAAGGAACATTGATCTGGTTTATGGAGGTGGAAGCATTGGTCTAATGGGTTTAGTTTCACAAGCTGTTCATGATGGCGGTCGGCATGTGATTGGAGTTATTCCCAAGACGCTCATGCCTCGAGAGCTAACTGGTGAAACAGTGGGAGAAGTGAAGGCAGTAGCAGATATGCACCAAAGGAAAGCAGAGATGGCAAAGCATTCTGATGCTTTTATTGCCTTACCAGGAGGTTATGGGACACTGGAAGAGCTCCTTGAAGCCATAACTTGGGCTCAACTTGGGATCCATGACAAGCCGGTGGGGTTACTGAATGTTGATGGATACTACAATTCCTTGCTGTCATTTATTGACCAAGCTGTTGAAGAGGGATTCATTAATCCAAATGCTCGGCACATAATTGTATCCGCACCAACCGCGAAAGAGTTGGTGATGAAATTGGAGGAATATGTCCCTTGTCATGAAAGTGTTGCTCCTAAGTTATGCTGGGAGATGGAATA 620 0.4484 MELESEIRLSKFKRICVFCGSSQGKKSSYQDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEAITWAQLGIHDKPVGLLNVDGYYNSLLSFIDQAVEEGFINPNARHIIVSAPTAKELVMKLEEYVPCHESVAPKLCWEME 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01959 206 PANTHER LOG FAMILY PROTEIN YJL055W 1 206 - -
Bva13g01959 206 Pfam Possible lysine decarboxylase 57 186 IPR031100 -
Bva13g01959 206 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 206 - -
Bva13g01959 206 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
Bva13g01959 206 Gene3D - 4 189 - -
Bva13g01959 206 SUPERFAMILY MCP/YpsA-like 11 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01959 Bva-Chr13 15772873 15776712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01959 K22522 - cit:102622373 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01959 13 15772873 15776712 Bva07g01271 07 13516123 13518113 ECH
Bva13g01959 13 15772873 15776712 Bva09g01296 09 7031494 7033056 ECH
Bva13g01959 13 15772873 15776712 Bva13g01959 13 15772873 15776712 ECH