Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00674 ATGAGCTGGAGTGGAGGAGATTGGATGTGCGGTGCTTGCCAGCACATAAATTTCAAGAAGCGGGATGCATGCCAACGTTGTGGATACCCCAAGTTTGGCGGACCAGACCCATCAGCTTATGGCTGCAATAGGACTGAAGCCTTGGCAGGGGACTGGTTTTGCACTGCCTTGAGCTGTGGAGCTCACAACTATGCCAGCCGATCAAGCTGCTATAGATGTGGTGCATCAAAGGATGATTGTCCTTATGGATATGGCTCTGATTGCAGCTTTCCCCCAGGATGGAAGACTGGTGATTGGGTTTGCACTAGAATTGGCTGTGGGGTGCATAACTATGCTAGTAGAACAGAATGCTTCAAATGCAAAGCACCAAGAGATTTTGGTGGTACAGattg 392 0.4898 MSWSGGDWMCGACQHINFKKRDACQRCGYPKFGGPDPSAYGCNRTEALAGDWFCTALSCGAHNYASRSSCYRCGASKDDCPYGYGSDCSFPPGWKTGDWVCTRIGCGVHNYASRTECFKCKAPRDFGGTD 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00674 130 Pfam Zn-finger in Ran binding protein and others 49 77 IPR001876 -
Bva05g00674 130 Pfam Zn-finger in Ran binding protein and others 95 124 IPR001876 -
Bva05g00674 130 Pfam Zn-finger in Ran binding protein and others 6 31 IPR001876 -
Bva05g00674 130 ProSitePatterns Zinc finger RanBP2-type signature. 99 120 IPR001876 -
Bva05g00674 130 Gene3D - 1 35 - -
Bva05g00674 130 Gene3D - 42 81 - -
Bva05g00674 130 Gene3D - 91 126 - -
Bva05g00674 130 ProSiteProfiles Zinc finger RanBP2 type profile. 48 79 IPR001876 -
Bva05g00674 130 SUPERFAMILY Ran binding protein zinc finger-like 45 78 IPR036443 -
Bva05g00674 130 ProSiteProfiles Zinc finger RanBP2 type profile. 95 126 IPR001876 -
Bva05g00674 130 SMART zf_4 50 76 IPR001876 -
Bva05g00674 130 SMART zf_4 97 123 IPR001876 -
Bva05g00674 130 SMART zf_4 6 30 IPR001876 -
Bva05g00674 130 SUPERFAMILY Ran binding protein zinc finger-like 3 34 IPR036443 -
Bva05g00674 130 PANTHER ZINC FINGER, RANBP2-TYPE-RELATED 1 127 - -
Bva05g00674 130 ProSitePatterns Zinc finger RanBP2-type signature. 52 73 IPR001876 -
Bva05g00674 130 SUPERFAMILY Ran binding protein zinc finger-like 92 126 IPR036443 -
Bva05g00674 130 PANTHER ZINC FINGER PROTEIN 1 127 - -
Bva05g00674 130 ProSiteProfiles Zinc finger RanBP2 type profile. 4 33 IPR001876 -
Bva05g00674 130 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00674 Bva-Chr5 3363631 3364760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00674 - - gmx:100792208 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01018 06 8390738 8391912 Bva05g00674 05 3363631 3364760 BWGD
Bva05g00674 05 3363631 3364760 Bva02g02479 02 23702618 23703505 ECH
Bva05g00674 05 3363631 3364760 Bva10g00356 10 4144592 4145248 ECH
Bva05g00674 05 3363631 3364760 Bva05g00674 05 3363631 3364760 ECH