Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02479 ATGAGCAGGCCAGGAGATTGGAACTGCAGGTCATGCCAGCATTTGAACTTTCAGAGGCGCGATTCATGCCAACGGTGCGGGGATCCAAAATATGGAGACAGAGTTGATTTTGGAGCATTTGGAGGAAGAGGAGGATCTTCATTTGGGTTCAGTGGGTCAGACGTGAGGCCAGGTGACTGGTATTGTGCCGTTGGTAACTGTGGAGCACATAACTTTGCTAGCCGCTCAAGCTGCTTCAAGTGTGGTGCTTTCAAGGATGACTTAGCTTCTGCTAATAACAGTGACATCTCCCGCTCCAGAGGCTATGGAGGTGGTGCCGTCCGCCCTGGATGGAAGTCCGGTGATTGGATATGCAGCAGGTCAGGATGTAACGAGCACAACTTTGCCAGCAGAATGGAATGCTTCAAATGCAGTGCCCCAAGGGACACATACTA 434 0.5115 MSRPGDWNCRSCQHLNFQRRDSCQRCGDPKYGDRVDFGAFGGRGGSSFGFSGSDVRPGDWYCAVGNCGAHNFASRSSCFKCGAFKDDLASANNSDISRSRGYGGGAVRPGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02479 144 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Bva02g02479 144 ProSitePatterns Zinc finger RanBP2-type signature. 60 81 IPR001876 -
Bva02g02479 144 ProSitePatterns Zinc finger RanBP2-type signature. 116 137 IPR001876 -
Bva02g02479 144 ProSiteProfiles Zinc finger RanBP2 type profile. 112 143 IPR001876 -
Bva02g02479 144 PANTHER OS02G0203700 PROTEIN 1 143 - -
Bva02g02479 144 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Bva02g02479 144 SMART zf_4 58 84 IPR001876 -
Bva02g02479 144 SMART zf_4 114 140 IPR001876 -
Bva02g02479 144 SMART zf_4 5 29 IPR001876 -
Bva02g02479 144 Pfam Zn-finger in Ran binding protein and others 56 83 IPR001876 -
Bva02g02479 144 Pfam Zn-finger in Ran binding protein and others 3 31 IPR001876 -
Bva02g02479 144 Pfam Zn-finger in Ran binding protein and others 112 141 IPR001876 -
Bva02g02479 144 ProSiteProfiles Zinc finger RanBP2 type profile. 56 87 IPR001876 -
Bva02g02479 144 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
Bva02g02479 144 Gene3D - 107 143 - -
Bva02g02479 144 Gene3D - 2 32 - -
Bva02g02479 144 Gene3D - 51 87 - -
Bva02g02479 144 PANTHER ZINC FINGER PROTEIN 1 143 - -
Bva02g02479 144 SUPERFAMILY Ran binding protein zinc finger-like 107 142 IPR036443 -
Bva02g02479 144 SUPERFAMILY Ran binding protein zinc finger-like 49 86 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02479 Bva-Chr2 23702618 23703505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02479 - - gmx:100499847 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01018 06 8390738 8391912 Bva02g02479 02 23702618 23703505 ECH
Bva05g00674 05 3363631 3364760 Bva02g02479 02 23702618 23703505 ECH
Bva02g02479 02 23702618 23703505 Bva02g02479 02 23702618 23703505 ECH