Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01867 ATGGATGACGAATATGCAAAGCTTATCAGGAGGATGAACCCACCAAGGGTTGTGATAGACAATGATTCCTGTGAAGATGCTACTGTTGTCCAGGTTGACTGTGTTAACAAACATGGGATTCTCCTGGATGTTGTCCAAGTTCTTACAGATATCAAccttataataagaaaagcCTATATTTCATCTGACGGGGTGTGGTTCATGGATgTGTTTAATGTGATTGATTGCAATGGAAACAAAATCAGAGATAAGGAAGTCATTGATTATATACAGAGGaaacttgaaaataatCCCAGCTTTGCACCCTCATTGAGAGGGACCGTTGGGGTTGTTCCTTCAGAAGAGCACACCTCAATTGAACTAACAGGTACAGACAGGCCTGGTTTACTGTCAGAAGTATGTGCAGTTCTCACAGACCTTCACTGTAATGTTGTGAACGCTGAGATATGGACACATAATACTAGGGCTGCTTCTGTAGTTCATGTGACAGATGATTCCAGTGGGTGTGCCATCAAGGATCCATCCCGTCTCTTTACAATAAAGGAGTTGCTTTGTAATGTCCTTAGGGGGAACAATGATCCAAAGACCGCAAGAACGACAGTTGTACCACCTGGAATCACGAATAGGGACAGAAGGTTACATCAGATTATGTTTGCTGACAGGGACTATGAAAAGGCTGAACAATGGGGAGTGAGAGACAAGAGTTCATTTCCCCACGTAACTGTGTCAGATTGTATTGAGAAAGAGTACACCGTGATTATCATGAGGGCAAAAGATCGGCCAAAATTACTGTTTGACATTGTTTGCACATTAACAGATATGGAGTATGTAATTTTTCATGGTGTGGTCCGTACAGAAAGGACAGAAGCTTATCAGGAATTTTATATTCGCCATGTCGATGGGCTCCCCATAAGCTCTGAAGCTGAAAGGGAACGTCTTGTGCAGTGCCTTGAAGCAGCCATTAAAAGGCGGGCATGTGAGGGGATGGAGCTAAAATTGTACACAGAAGATCGTGTAGGACTCCTCTCAGATATCACAAGGACATTCCGAGAGAACAGTTTATGTATCAGAAGAGCGGAAATATCAACACAAGGTGGAAAGGCAAAGGACACTTTCTATGTTACTGATGTATCGGGCAATCCAGTTGATCCCAAGATTATTGATGCAATACGCAGACAGATTGGTCCCACAGCATTACAGGTCAAACCCAACTCAGCTCTTTCACCAAAGCCCACTCAGGGCTCAACAATGGGTTTCCTTTTTGGGAATTTCTTCAAAGCTCGATCCTTTCAGAATTTTAAGTTGATCAGATCTTATTCTTA 1322 0.4191 MDDEYAKLIRRMNPPRVVIDNDSCEDATVVQVDCVNKHGILLDVVQVLTDINLIIRKAYISSDGVWFMDVFNVIDCNGNKIRDKEVIDYIQRKLENNPSFAPSLRGTVGVVPSEEHTSIELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAASVVHVTDDSSGCAIKDPSRLFTIKELLCNVLRGNNDPKTARTTVVPPGITNRDRRLHQIMFADRDYEKAEQWGVRDKSSFPHVTVSDCIEKEYTVIIMRAKDRPKLLFDIVCTLTDMEYVIFHGVVRTERTEAYQEFYIRHVDGLPISSEAERERLVQCLEAAIKRRACEGMELKLYTEDRVGLLSDITRTFRENSLCIRRAEISTQGGKAKDTFYVTDVSGNPVDPKIIDAIRRQIGPTALQVKPNSALSPKPTQGSTMGFLFGNFFKARSFQNFKLIRSYS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01867 440 Pfam ACT domain 335 392 IPR002912 -
Bva04g01867 440 Pfam ACT domain 117 166 IPR002912 -
Bva04g01867 440 Gene3D - 329 394 - -
Bva04g01867 440 CDD ACT_ACR_3 250 324 - -
Bva04g01867 440 Gene3D - 113 183 - -
Bva04g01867 440 ProSiteProfiles ACT domain profile. 29 113 IPR002912 -
Bva04g01867 440 CDD ACT_ACR_2 117 190 - -
Bva04g01867 440 SUPERFAMILY ACT-like 328 396 IPR045865 -
Bva04g01867 440 ProSiteProfiles ACT domain profile. 330 409 IPR002912 -
Bva04g01867 440 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 432 IPR040217 -
Bva04g01867 440 SUPERFAMILY ACT-like 113 170 IPR045865 -
Bva04g01867 440 CDD ACT_ACR_4 328 399 - -
Bva04g01867 440 SUPERFAMILY ACT-like 24 95 IPR045865 -
Bva04g01867 440 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR6 1 432 - -
Bva04g01867 440 ProSiteProfiles ACT domain profile. 118 204 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01867 Bva-Chr4 19184030 19187305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01867 - - gmx:100818506 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01867 04 19184030 19187305 Bva04g01867 04 19184030 19187305 ECH
Bva06g01709 06 11935041 11938305 Bva04g01867 04 19184030 19187305 ECH
Bva05g00076 05 381298 384122 Bva04g01867 04 19184030 19187305 ECH