Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00076 ATGGATTGTTGGTCATCTTCTTTGGCGGTGGATGAAGAATTTGAGAAGCTCGTCATTCGAATGAATCCTCCCAGGGTTACTGTTGATAACACTTCTAGCAGGACAACCACTTTGATTAAGGTTGACAGTGCAAACAAGCGTGGGAGTTTGTTGGAGGTCGTTCAGGTTCTTACTGATATGAATCTCATTATAAGACGAGCTTACATTTCTTCAGACGGAGAATGGTTCATGGATGTTTTTCATGTTACGGATCAAAATGGGGATAAGCTTCTTGAAGCTGATGTAGCCGACCGCATTCAACAGTCACTGGGCTCAAGAGGTCGTAGTTTTCGGTCCTTGAGAAGGTCCGTTGGTGTCCAAGCTGCGGCAGAACATACAACGATTGAACTGACTGGACGAGACAGGCCAGGATTGCTCTCTGAAGTTTTTGCTGTTCTTGCAGACCTCAAATGCAATGTGGTAGCAGCAGAAGTCTGGACCCACAATTCGAGAATGGCATCAGTTGTTTACATCACTGACGAGGAAACTGGATTGTCAATTGACAATGCCGATCGCCTTGCTAAAATCAGACAGCTTCTACAATACGTGTTGAAAGGAGATAGAGATAAGCGGAGTGCCAACACTGCTGTTTCTCTAGGTTCTACTCATAAGGAAAGGAGGCTGCATCAAATGATGTATGCTGATCGTGATTATGATATTAATGATGGGGATTGTGGCTCAACAAGTAACAGGAGCAAACTCCTAGTCACCATGGATGATTGTTCAGAGAAGAAATACACTGTTGTGAGTTTGAGGTGTCCAGACAGACCTAAGTTACTGTTCGATACAGTGTGCACACTCACCGACATGCAATATGTGGTATACCATGGAACTGTCATTGCAGAAGGACCAGAGGCATATCAGGAATATTATATAAGGCACACGGATGGATACCCTATTAACTGTGAAACAGAGAGGCAAAGAGTGATCCACTGCTTGGAGGCTGCTATCAGGAGACGAACTTCTGAGGGCATGCAGCTAGAACTGTGTAGTGAAGACAGGGTTGGGCTTCTGTCTGATGTAACTCGCATTTTTAGAGAAAACGGTCTTTTAGTGAGCCGTGCAGAGGTTACAACCAGGGGTTCCCAAGCCATGAATATCTTCTATGTGACAGATGCATCTGGGAATTCAGTTAAGAGAGAAACAATTGAGGCAGTTAGAAAAGAGATTGGCCAAACCATACTGCGTGTGAAAGATGATATGTACTCGAAATCTCCATCCCAGGAGAGCGGCAGGTTCTCTTTGGGCAGTCTCTTTCGATCAAGCTCTGAGAAGTTTCTTTACAACTTGGGTCTAATCAAGTCTTGTTCTTG 1352 0.4445 MDCWSSSLAVDEEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIIRRAYISSDGEWFMDVFHVTDQNGDKLLEADVADRIQQSLGSRGRSFRSLRRSVGVQAAAEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEETGLSIDNADRLAKIRQLLQYVLKGDRDKRSANTAVSLGSTHKERRLHQMMYADRDYDINDGDCGSTSNRSKLLVTMDDCSEKKYTVVSLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHTDGYPINCETERQRVIHCLEAAIRRRTSEGMQLELCSEDRVGLLSDVTRIFRENGLLVSRAEVTTRGSQAMNIFYVTDASGNSVKRETIEAVRKEIGQTILRVKDDMYSKSPSQESGRFSLGSLFRSSSEKFLYNLGLIKSCS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00076 450 SUPERFAMILY ACT-like 124 196 IPR045865 -
Bva05g00076 450 SUPERFAMILY ACT-like 334 405 IPR045865 -
Bva05g00076 450 Gene3D - 336 411 - -
Bva05g00076 450 Gene3D - 125 201 - -
Bva05g00076 450 ProSiteProfiles ACT domain profile. 127 204 IPR002912 -
Bva05g00076 450 PANTHER OS08G0515400 PROTEIN 1 448 - -
Bva05g00076 450 CDD ACT_ACR_3 259 333 - -
Bva05g00076 450 Pfam ACT domain 340 399 IPR002912 -
Bva05g00076 450 Pfam ACT domain 126 175 IPR002912 -
Bva05g00076 450 Pfam ACT domain 38 95 IPR002912 -
Bva05g00076 450 ProSiteProfiles ACT domain profile. 38 118 IPR002912 -
Bva05g00076 450 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 448 IPR040217 -
Bva05g00076 450 SUPERFAMILY ACT-like 34 103 IPR045865 -
Bva05g00076 450 ProSiteProfiles ACT domain profile. 339 418 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00076 Bva-Chr5 381298 384122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00076 - - jre:108985470 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00076 05 381298 384122 Bva05g00076 05 381298 384122 ECH
Bva05g00076 05 381298 384122 Bva04g01867 04 19184030 19187305 ECH