Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01709 ATGGATTGTTGGTCCTCTTCTTTGGCGGTGGATGAAGAATTTGCGAAGCTCGTCATTCGAATGAATCCTCCCAGGGTTACTGTTGATAACGCTTCCAGCAGGACAACCACTTTGATTAAGGTTGACAGTGCAAATAAGCGTGGGAGTTTGTTGGAGGTCGTTCAGGTTCTTACAGATATGAATCTCATAATCAGACGAGCTTACATTTCTTCGGATGGAGAATGGTTCATGGACGTTTTTCATGTTACCGATCAAAATGGGGATAAGCTTCTTGAAGCTGAGGTAGCTGACCGCATTCAACAGTCACTGGGCCCAAGAGGTCGTAGTTTTCGGTCCTTGAGAAGATCCGTTGGTGTCCAAGCTGCGTCAGAACATACAACGATTGAATTGACTGGACGAGACAGGCCAGGATTGCTCTCAGAAGTTTTTGCTGTTCTGGCGGACCTCAAATGCAATGTGGTAGCAGCAGAAGTCTGGACCCACAATTCGAGAATGGCATCAGTTGTTTACATCACTGACGAGGAAACTAGATTGTCAATTGACAACGCTGATCGCCTTGCTAAGATTAAACAGCTTCTACAATATGTGTTGAAAGGGGAAAGAGATAAGCGGAGTGCCAAAACTGCTGTTTCTCTAGGTTCTACTCACAAGGAAAGGAGGCTGCACCAAATGATGTATGCTGATCGTGATTATGATATCAACGATGGGGATTCTGGCTCAACAAGTGACAGGAGTAAACCCCTTGTCACCGTGGATGATTGTTCAGATAAGAAATACACCGTTGTGAATTTGAGGTGTCCAGACCGTCCTAAGTTACTGTTTGATACAGTGTGCACACTCACCGACATGCAATACGTGGTATACCATGGAACTGTCATTGCTGAAGGACCAGAGGCATATCAGGAATATTATATAAGGCACATGGATGGATGCCCTATTAGTTCAGAAGCAGAGAGGCAAAGGGTGATCCACTGCTTGGAGGCTGCTATCAGGAGACGAACTTCTGAGGGTATGCGGCTAGAACTGTGTAGTGAAGACAGGGCTGGGCTTCTTTCTGATGTGACTCGCATTTTTAGAGAAAACGGCCTTTCGGTGAGCCGTGCAGAGGTTACAACCAGGGGTTCCCAAGCCATGAATGTGTTTTATGTGACTGATGCATCTGGAAATTCAGTTAAGAGCGAAACAATTGAGGCAGTGCGAAAAGAGATTGGCCTCACCATACTGCGCGTGAAAGATGATGTCCACTCGAAATCTCCATCCCAGGAGAGCAGCAGATTCTCTCTGGGTAATCTCTTTCGATCAAGCTCTGAGAAGTTTCTTTATAACTTGGGTCTGATCAAGTCTTATTCTTG 1352 0.4564 MDCWSSSLAVDEEFAKLVIRMNPPRVTVDNASSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIIRRAYISSDGEWFMDVFHVTDQNGDKLLEAEVADRIQQSLGPRGRSFRSLRRSVGVQAASEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEETRLSIDNADRLAKIKQLLQYVLKGERDKRSAKTAVSLGSTHKERRLHQMMYADRDYDINDGDSGSTSDRSKPLVTVDDCSDKKYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHMDGCPISSEAERQRVIHCLEAAIRRRTSEGMRLELCSEDRAGLLSDVTRIFRENGLSVSRAEVTTRGSQAMNVFYVTDASGNSVKSETIEAVRKEIGLTILRVKDDVHSKSPSQESSRFSLGNLFRSSSEKFLYNLGLIKSYS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01709 450 CDD ACT_ACR_4 337 408 - -
Bva06g01709 450 Pfam ACT domain 38 97 IPR002912 -
Bva06g01709 450 Pfam ACT domain 340 398 IPR002912 -
Bva06g01709 450 Pfam ACT domain 126 176 IPR002912 -
Bva06g01709 450 Gene3D - 336 412 - -
Bva06g01709 450 SUPERFAMILY ACT-like 123 195 IPR045865 -
Bva06g01709 450 SUPERFAMILY ACT-like 34 103 IPR045865 -
Bva06g01709 450 SUPERFAMILY ACT-like 335 404 IPR045865 -
Bva06g01709 450 ProSiteProfiles ACT domain profile. 339 415 IPR002912 -
Bva06g01709 450 ProSiteProfiles ACT domain profile. 38 118 IPR002912 -
Bva06g01709 450 ProSiteProfiles ACT domain profile. 127 204 IPR002912 -
Bva06g01709 450 CDD ACT_ACR_3 259 333 - -
Bva06g01709 450 PANTHER OS08G0515400 PROTEIN 1 448 - -
Bva06g01709 450 Gene3D - 125 205 - -
Bva06g01709 450 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 448 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01709 Bva-Chr6 11935041 11938305 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01709 - - gmx:100798999 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01709 06 11935041 11938305 Bva06g01709 06 11935041 11938305 ECH
Bva06g01709 06 11935041 11938305 Bva04g01867 04 19184030 19187305 ECH