Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01146 ATGAGAAACAGCATCTTGCAGGGGTATGACAGCTACGGATCGGGGCTTTTCCGTCATTTCACAGATACGATCTGGCGACCATTTATGAAGTCATCAGCAAGATCTATTGTCCTTCTCGCCTTCTCTGTCCTCCTCCTCATCGGCGCGTTGGCCTGCACGCGCTTGCTGGACCCCGCTGTGATTTTTGGAAATTTAGGTTCGAAACCAATTGCAACAACCAAAATATACTATCCGTACACTGACAAAATACCTGAAATATCAAACAAGCCCCGGAAGAAGGTTGAAATTCCAGCCAACTGCACAGCTTACAAACTAACTCAAACATGTCCCTCAGACTATCCAACTTCGTTCCAACCGGAGGATTATCCTCACCGTTCATCAACCCCCACGTGTCCCGAGTACTTCCGTTGGATCCACGAAGATCTTCGGCCATGGGCACACAGTGGCATAACGAAGGATATGATTGAAAGAGCTAAGCGAACTGCTAATTTTAAGTTGACAATATTAAATGGGAAGGCTTACTTGGAGACCTATCAGAAGGCATTCCAAACGAGAGACATTTTTACGCTGTGGGGGATCCTACAGTTGTTACGGAGGTACCCAGGGAAAGTGCCTGATTTGGAGCTTATGTTTGATTGTGTTGATTGGCCTGTAATTCTATCAGAACACTACAGTGGGCCCAAGGCCCAAGTTCCACCTCCGCTATTTCGGTATTGTGGTAGTGATACCACGCTGGACATCGTTTTCCCAGATTGGTCGTTTTGGGGATGGAGTGAGGTTAATATAAAGCCATGGGAGCTTCTTCTGGAAGAACTGAAAGAAGGGAACAAGAGGAGAAGTTGGATGAAGAGAGAGCCTTATGCTTATTGGAAAGGTAATCCAACTGTTGCTGAGACCAGACAAGACCTCATGAAATGCAATGTATCTGAAGCTCAAGATTGGAAAGCTCGGGTATATGCCCAGGATTGGATAAGGGAATCACACGAAGGGTACAAGCAATCAGACTTGGCAAGCCAGTGCACTCATAGGTATAAGATTTACATTGAAGGGTCTGCTTGGTCTGTCAGTGAAAAATACATTCTAGCTTGTGATTCAGTCACCTTGATAGTTAAGCCTCATTACTACGACTTCTTTTCAAGAGGTTTGATTCCAGTGCACCACTACTGGCCTATTACGGAAGATGACAAGTGCAGATCTATTAAGTATGCTGTTGATTGGGGCAATAGGCACAAGCAAAAGGCAAAAGCCATTGGAAAGGCAGCAAGTGATTTCATTCAAGAAGAATTAAAGATGGATTATGTGTATGACTACATGTTTCATCTTCTAAATTCATATGCTAAGCTTTTCAGATACAAGCCCACTAAAAGTGAAGCAGCTGTAGAACTATGTGTAGAATCTATGGTTTGTAAAGCAGAAggttttgaaaagaaattcatgATGGAATCAATGGTGAAGAGTCCTGCAAATACCAATCCATGCACCATGCCTCCTCCCTATGACCCTCCTTCTTTATATGCAAATTTAAGGAGGAATGAAGCTACAATTCAACAAGTACAATCATGGGAGAAACAGACCATGTA 1580 0.4323 MRNSILQGYDSYGSGLFRHFTDTIWRPFMKSSARSIVLLAFSVLLLIGALACTRLLDPAVIFGNLGSKPIATTKIYYPYTDKIPEISNKPRKKVEIPANCTAYKLTQTCPSDYPTSFQPEDYPHRSSTPTCPEYFRWIHEDLRPWAHSGITKDMIERAKRTANFKLTILNGKAYLETYQKAFQTRDIFTLWGILQLLRRYPGKVPDLELMFDCVDWPVILSEHYSGPKAQVPPPLFRYCGSDTTLDIVFPDWSFWGWSEVNIKPWELLLEELKEGNKRRSWMKREPYAYWKGNPTVAETRQDLMKCNVSEAQDWKARVYAQDWIRESHEGYKQSDLASQCTHRYKIYIEGSAWSVSEKYILACDSVTLIVKPHYYDFFSRGLIPVHHYWPITEDDKCRSIKYAVDWGNRHKQKAKAIGKAASDFIQEELKMDYVYDYMFHLLNSYAKLFRYKPTKSEAAVELCVESMVCKAEGFEKKFMMESMVKSPANTNPCTMPPPYDPPSLYANLRRNEATIQQVQSWEKQTM 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01146 526 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 43 524 - -
Bva04g01146 526 SMART cap10 203 452 IPR006598 -
Bva04g01146 526 Pfam Glycosyl transferase family 90 127 522 IPR006598 -
Bva04g01146 526 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 43 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01146 Bva-Chr4 7709820 7714978 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01146 - - zju:107414489 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01401 03 13419505 13423663 Bva04g01146 04 7709820 7714978 ECH
Bva02g01872 02 20417357 20420470 Bva04g01146 04 7709820 7714978 ECH
Bva04g01146 04 7709820 7714978 Bva04g01146 04 7709820 7714978 ECH