Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01872 ATGGCTCAGCAGTCGCATTCCATTCGGGTTTTCTTCTTGAATAAGGGCTATCAATCATTCAGCGCAGCGAAGAGATGGGTTTCAGCCACGCCTTcgttcatcttcttcttcctctttctctttacaTCTGCAATTCTAATTGATCCTTCCAAAATTACAAGCTTCTCTCTTCTCAAAACTGTTACAAAGAATCAACGTATCACCCTCAATTGCATCAATGGGAACTTGACAACGTGCCCATCAAATTACCCAACGACGCCGTTTAAGTTAGACATGACATCAACCGAAACTTGCCCAGAATACTTTAGATGGATCCACGAAGACCTCAAACCATGGAAAAACACAGGGATCACAAGGAACATGGTGGAGGCTGCCAGAAACATATCACACTTCAGGCTTGTGATTCTGAAGGGAAAGGTTTATGTGGAAAAACATCGGCAAGTGTTTCAGACAAGAGACGTGTTTACCATATGGGGAATTCTACAGCTCCTAAGGTTGTATCCTGGGGAGGTGCCAGATTTAGAGCTTTTCTTCCAATGTGCGGATAAAACGGTGGTGAACAAAGGAAGCTTCCGAGGGTCGCCGCCACCTCCGGTGTTCCATTACAGTGGCAGGGAATCTGCATTTGACATTGTCTTCCCTGACTGGTCCTTCTGGGGTTGGGCTGAGATACACATAGGGCCGTGGGAGGCAATATTAGAGGCTATACAGAAGGGCAACAAGGAAACGAAATGGAAGAACAGGATACCGTACGGTTTTTGGAAGGGCAACCCAAGAGTGGCTTATATTAGGAAGCAACTCTGCAAGTGCAATGTCTCAGGCCAACATGACTGGAATGCACGTATATACGACATCAACTGGaagattgaaagaaaaaacagttACGAGGGCACAAAGCTTGAAGATCAATGTAACTAcagGTACAAGATTTATGTAGAAGGAGTTTCGTGGTCTCACTACTGGCCCATCAGCACCCAAAATATGTGCCAAGATATCAAGTTTGCAGTGGATTGGGGCAATAATCACACTGACAagGCACAAGAGATTGGCCGAGAAGGAAGCAACTACATCCACGAAAAGCTTAAGATGAAATTTGTGTATGATTACATGTTTCATTTGTTGCAAGAATACGCAAGGCTCATGAGATTTGAACCTGCCATACCAGCAGGAGCAGTTGAGGTTTGTTCTGAGAGCTTGGCATGTTCCAAGAGACGTGGATTGAGGGAGTTAATGCAACAGTCAATGGTTACGAAGTCAAGTGCTAAGCTACCTTGTACGCTGCCTCCTCCTTATAAACCTCGAGAACTCCGAGAGTTTCTGCAGAGAAAGGAGAGTTCAATCAAGCAAATGGAGATGAAGAATGGTGAATACTTTAACAGCTTGAACAATGctaagcatta 1400 0.4279 MAQQSHSIRVFFLNKGYQSFSAAKRWVSATPSFIFFFLFLFTSAILIDPSKITSFSLLKTVTKNQRITLNCINGNLTTCPSNYPTTPFKLDMTSTETCPEYFRWIHEDLKPWKNTGITRNMVEAARNISHFRLVILKGKVYVEKHRQVFQTRDVFTIWGILQLLRLYPGEVPDLELFFQCADKTVVNKGSFRGSPPPPVFHYSGRESAFDIVFPDWSFWGWAEIHIGPWEAILEAIQKGNKETKWKNRIPYGFWKGNPRVAYIRKQLCKCNVSGQHDWNARIYDINWKIERKNSYEGTKLEDQCNYRYKIYVEGVSWSHYWPISTQNMCQDIKFAVDWGNNHTDKAQEIGREGSNYIHEKLKMKFVYDYMFHLLQEYARLMRFEPAIPAGAVEVCSESLACSKRRGLRELMQQSMVTKSSAKLPCTLPPPYKPRELREFLQRKESSIKQMEMKNGEYFNSLNNAKH 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01872 466 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 19 318 - -
Bva02g01872 466 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 319 453 - -
Bva02g01872 466 PANTHER GLYCOSYLTRANSFERASE FAMILY 90 PROTEIN 19 318 - -
Bva02g01872 466 PANTHER GLYCOSYLTRANSFERASE FAMILY 90 PROTEIN 319 453 - -
Bva02g01872 466 SMART cap10 170 384 IPR006598 -
Bva02g01872 466 Pfam Glycosyl transferase family 90 94 318 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01872 Bva-Chr2 20417357 20420470 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01872 - - gmx:100787989 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01872 02 20417357 20420470 Bva03g01401 03 13419505 13423663 ECH
Bva02g01872 02 20417357 20420470 Bva04g01146 04 7709820 7714978 ECH
Bva02g01872 02 20417357 20420470 Bva02g01872 02 20417357 20420470 ECH