Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01401 ATGAAAGAGAACAACATCTCGCAGGTGTTGCATGGGAATGACATCTATGGATCGGGGCTTTCCCGTCATTCCCCAGACGCGATCTGGCGATCGTTTACCAAGTCATCAACAAGATCTATTGTCGTTCTCGTCTTCTCCGTCCTCCTCATTGTCGGCGCGTTTGCCTGCACGCACCTGCTCGACCCCATTATCATTTTGGGGAATTTCGGTTCGAAAGCAGCAGCGACGACCCAACTATACGATACGTTCCCTCGGAGACCAAACAAGCCCCAGAAGAAAGTTGAAATCCCAATCAACTGCGCTGCTTACAACCTAACCGGGACATGTCCCTCAGACTATCCAACACCGTTCCAACCAGACGATGATCCTAACCGTCCATCAACAACTCCGACGTGTCCCGATTACTTCCGTTGGATCCACGAAGATCTTCGGCCGTGGGCCCGCAGTGGCATTACAAAGGACATGGTGGAAAGAGCTAGACAAACTGCCAATTTTAAATTGGTGATATTGAATGGGAAGGCTTACTTGGAGACGTTTGAGAAGGCATTCCAAACGAGAGACGTTTTTACGCTGTGGGGGATCCTACAGTTGTTACGGAGGTACCCCGGGAAACTGCCTGATTTGGAGCTCATGTTTGATTGTGTTGATTGGCCCGTAGTCCAATCAGAACAATACAGTGGGTCCAATGCCTCTGGCCCACCACCGCTGTTTCGCTATTGCGGTAATGATGCCACGCTGGATATTGTTTTCCCGGATTGGTCCTTCTGGGGATGGGCTGAGGTTAATATAAAGCCATGGGAGATTGTGGTGGGAGAACTGAAAGAAGGGAACAAGAGGATAGGGTGGATGAATAGAGAGCCTTATGCTTATTGGAAAGGCAATCCGACAGTTGCTGAGACTAGACAAGACCTCATGAAATGCGATGTAACTCAAGGACAAGAGTGGAATGCTCGTTTATATGCCCAGGATTGGGGACGAGAATCACAGGAAGGGTACAAGCATTCAGACTTGGCAAATCAATGCACTCATAGGTACAAGATTTACATTGAAGGGTCTGCTTGGTCAGTGAGTGAAAAATACATTCTAGCTTGTGATTCAGTCACCTTGATGGTTACTCCTCATTTCTATGACTTCTTCACAAGGGGTTTGATTCCACTTTACCACTATTGGCCCATCAAGGAATATGACAAGTGCAGGTCCATTAAGTATGCTGTTGATTGGGGCAATAGCCACCAGCAAAAGGCACAAGCTATTGGGAAGGCAGCAAGTGATTTCATTCAAGAAGAATTAAAGATGGATTATGTGTACGACTACATGTTTCATCTTCTGAATTCATATGCTAAGCTTTTCAGATACAAGCCCACTAAAAGTGAAGCAGCTAAAGAACTATGTGTAGAGGCCATGGTTTGTAAAGCAGAGGGTAATGAACAGAAATTTATGATGGAATCTATGGTGGACAGTCCTGCAAATACCAATCCATGCACCATGCCTCCTCCCTACGACCCTCCTTCTTTACATGCAAATTTAAGGAGGAAGGAAACTACGATTCAACAAGTAGATTTTTGGGACAAGCAGGGTCCATA 1583 0.463 MKENNISQVLHGNDIYGSGLSRHSPDAIWRSFTKSSTRSIVVLVFSVLLIVGAFACTHLLDPIIILGNFGSKAAATTQLYDTFPRRPNKPQKKVEIPINCAAYNLTGTCPSDYPTPFQPDDDPNRPSTTPTCPDYFRWIHEDLRPWARSGITKDMVERARQTANFKLVILNGKAYLETFEKAFQTRDVFTLWGILQLLRRYPGKLPDLELMFDCVDWPVVQSEQYSGSNASGPPPLFRYCGNDATLDIVFPDWSFWGWAEVNIKPWEIVVGELKEGNKRIGWMNREPYAYWKGNPTVAETRQDLMKCDVTQGQEWNARLYAQDWGRESQEGYKHSDLANQCTHRYKIYIEGSAWSVSEKYILACDSVTLMVTPHFYDFFTRGLIPLYHYWPIKEYDKCRSIKYAVDWGNSHQQKAQAIGKAASDFIQEELKMDYVYDYMFHLLNSYAKLFRYKPTKSEAAKELCVEAMVCKAEGNEQKFMMESMVDSPANTNPCTMPPPYDPPSLHANLRRKETTIQQVDFWDKQGP 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01401 527 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 35 525 - -
Bva03g01401 527 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 35 525 - -
Bva03g01401 527 Pfam Glycosyl transferase family 90 128 522 IPR006598 -
Bva03g01401 527 SMART cap10 204 453 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01401 Bva-Chr3 13419505 13423663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01401 - - gmx:100789969 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01401 03 13419505 13423663 Bva04g01146 04 7709820 7714978 ECH
Bva02g01872 02 20417357 20420470 Bva03g01401 03 13419505 13423663 ECH
Bva03g01401 03 13419505 13423663 Bva03g01401 03 13419505 13423663 ECH