Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02132 ATGGATAAGACATCACACAGTGATAACTCCTCTACTTCTCTCTTGTTTAGTTTGgtctatctttttctttacgGTTCAGTTTTCAACAAGATACAGAGCttgtattcaattttttctgtTCTCCTTCTGCTCCATTTTTATTCTGGGAACTCAAAGATTAGAGGGGAGAAGCAATTTTCAGAATCTGAGTTGAGCCACAGAGAGAAATTGCTCCATGGGAGTAGAGAAGATGATGGGAAGCTTGGCCGAGAGGAGGTGaaaatgataatgaaaaaGTTGGGACTTTTTTGCTGCCCAGAAAGTGAGGAACTTGAGGAACGGTATGGTTCCAGTGACGTCTCTGGTCTGTTTGAAGTGCAGGAACCAAGCTTGGATGAGGTGAAGCAAGCTTTTGATGTGTTCGATAAGAACAGAGATGGGTTTATTGATGCAGTGGAGTTGCAGAGAGTTCTCCTTATATTGGGGGTGAAGGAAGCAACGGAACTGGAGAACTGCCAGAAAATGATCAGGAACTTGGATAAAAATAGAGATGGAAGAATAGATTTCAAtgaatttgtaaaaattatgGAGAACAGCTTTtactg 584 0.375 MDKTSHSDNSSTSLLFSLVYLFLYGSVFNKIQSLYSIFSVLLLLHFYSGNSKIRGEKQFSESELSHREKLLHGSREDDGKLGREEVKMIMKKLGLFCCPESEELEERYGSSDVSGLFEVQEPSLDEVKQAFDVFDKNRDGFIDAVELQRVLLILGVKEATELENCQKMIRNLDKNRDGRIDFNEFVKIMENSFY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02132 194 ProSitePatterns EF-hand calcium-binding domain. 135 147 IPR018247 -
Bva03g02132 194 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 10 193 - -
Bva03g02132 194 ProSiteProfiles EF-hand calcium-binding domain profile. 160 194 IPR002048 GO:0005509
Bva03g02132 194 SUPERFAMILY EF-hand 58 189 IPR011992 -
Bva03g02132 194 ProSitePatterns EF-hand calcium-binding domain. 173 185 IPR018247 -
Bva03g02132 194 PANTHER CALCIUM-BINDING PROTEIN CML45-RELATED 10 193 - -
Bva03g02132 194 ProSiteProfiles EF-hand calcium-binding domain profile. 122 157 IPR002048 GO:0005509
Bva03g02132 194 Pfam EF-hand domain pair 126 190 IPR002048 GO:0005509
Bva03g02132 194 Gene3D - 52 192 - -
Bva03g02132 194 CDD EFh 126 189 IPR002048 GO:0005509
Bva03g02132 194 ProSitePatterns S-100/ICaBP type calcium binding protein signature. 168 189 IPR001751 -
Bva03g02132 194 SMART efh_1 126 154 IPR002048 GO:0005509
Bva03g02132 194 SMART efh_1 164 192 IPR002048 GO:0005509
Bva03g02132 194 SMART efh_1 65 93 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02132 Bva-Chr3 18771528 18772112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02132 15 193 EF-hand Containing Proteins AT5G39670 47.514 1.08e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02132 K02183 - gmx:100791253 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02132 03 18771528 18772112 Bva03g02132 03 18771528 18772112 ECH
Bva03g02132 03 18771528 18772112 Bva04g00290 04 1760944 1761540 ECH
Bva08g01508 08 7934672 7935334 Bva03g02132 03 18771528 18772112 ECH