Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1803 ATGGCTCTGTTCTCGCGTTACCAACATTCTTCTCAATTCTTATTATGTTTCTTCCTTTTCCTAGTTTTCAAAGGAGTCTCAGGGGCTACATTCACGTTTGTGAATAAGTGCGATTACACAGTGTGGCCTGGAGTACTAGGAAAACCAGACATCGGAAGCACAGGATTCGAGCTCCAAAAGGGAAGCTCTCGAAGCTTCCAAGCCCCCACGGGTTGGTCCGGGAGATTCTGGGCCCGAACCGACTGCAAATTCGACGAATCCGGCAACGGAACTTGCGCCACAGGAGACTGCGGCTCCGGCGCGATCGACTGCAAGGGAGCCGGCGCAGCGCCTCCGGCGACGCTAGCCGAGTTCACCCTCGGCTCCTCCGACTCCCAGGACTACTACGACGTCAGCCTCGTCGATGGCTACAATCTGCCGATGATGGTGGAAGCGAGCGGTGGGTCGGGGTCGTGCTCTAGCACAGGGTGCGTGGCGGACCTCAACCGGCGGTGCCCATCGGAGCTGAGGGTGGACAGCGGCGGCGCATGTAAGAGCGCGTGCGGCGCGTTTGGGACGCCGGAGTATTGCTGTAACGGCGCGTTTGGGTCTCCGGCCACGTGCAAGCCGTCCATGTACTCGCAGATGTTCAAGTCGGCGTGTCCTAAGTCGTACAGTTACGCCTACGATGATGCCACAAGCACTTTCACTTGTACGGCAGCTGATTATACTGTCACATTCTGTCCTCCTTCTTCCCCAAGTCTGAAATCTTCAACGGATTCATCTTCGCAAGGAACAGAATCGTCTTCATCTTCATCAGGGGAAGAAACAGCACTAGCTGCAACTTCATGGCTTGCTAATTTAGCGACAGGGGCTTCAACGAGAAGCCATGATCGAGGAGCTTCGATTTCTGCAATTTTTGTCGGAATTACTCTCATTCTTTCACTTTTGGTGTCGTGGTAG 942 0.5467 MALFSRYQHSSQFLLCFFLFLVFKGVSGATFTFVNKCDYTVWPGVLGKPDIGSTGFELQKGSSRSFQAPTGWSGRFWARTDCKFDESGNGTCATGDCGSGAIDCKGAGAAPPATLAEFTLGSSDSQDYYDVSLVDGYNLPMMVEASGGSGSCSSTGCVADLNRRCPSELRVDSGGACKSACGAFGTPEYCCNGAFGSPATCKPSMYSQMFKSACPKSYSYAYDDATSTFTCTAADYTVTFCPPSSPSLKSSTDSSSQGTESSSSSSGEETALAATSWLANLATGASTRSHDRGASISAIFVGITLILSLLVSW 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1803 313 FunFam THAUMATIN-LIKE PROTEIN 1 29 242 - -
Bisa11g1803 313 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Bisa11g1803 313 CDD TLP-PA 30 241 - -
Bisa11g1803 313 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Bisa11g1803 313 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Bisa11g1803 313 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Bisa11g1803 313 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Bisa11g1803 313 PRINTS Pathogenesis-related protein signature 232 241 IPR001938 -
Bisa11g1803 313 PANTHER OS03G0233200 PROTEIN 16 242 IPR001938 -
Bisa11g1803 313 SMART tha2 31 242 IPR001938 -
Bisa11g1803 313 Pfam Thaumatin family 35 242 IPR001938 -
Bisa11g1803 313 PIRSF PR5 2 285 IPR001938 -
Bisa11g1803 313 MobiDBLite consensus disorder prediction 245 267 - -
Bisa11g1803 313 SUPERFAMILY Osmotin, thaumatin-like protein 29 243 IPR037176 -
Bisa11g1803 313 Gene3D Thaumatin 29 242 IPR037176 -
Bisa11g1803 313 ProSiteProfiles Thaumatin family profile. 28 242 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1803 Bisa-ChrBisa11 39811454 39812597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1803 10 264 Receptor kinase-like Gene Family AT5G38280 47.566 1.42e-81 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1803 11 39811454 39812597 Bisa11g1803 11 39811454 39812597 ECH
Bisa01g4110 01 98715570 98717849 Bisa11g1803 11 39811454 39812597 ECH
Bisa01g4109 01 98701555 98706800 Bisa11g1803 11 39811454 39812597 ECH