Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4109 ATGGGACGCCTCCTTCTCTTACTCACCTTCCTCGCATTATCTTTCGTTTCAGAGGTACAATCAGCGTCGTTCAAGATCGTAAACAAGTGCCGCCACACGATATGGCCGGGGTTTCTCTCCGGCGCGACTTCGCCGCCGCTTCCCACCACTGGCTTCGTTCTCAAAAGCGGCAAGTCAAAGACCATAAAAATCCCGAAATCTTGGTCTGGTCGGATTTGGGCGCGGACCCTGTGCGGCGTAGACTCCGACGGGAAGTTCTCCTGCCTCACAGCCGACTGCGGTTCCGGCAAAGTGGAGTGCGTCGGCGGAGCAAAGCCGCCGGCGTCGCTGGCGGAGTTCACTCTCAACGGCGCCGACGGGTTGGATTTCTACGACGTGAGCTTGGTCGACGGCTACAACCTCCCGATGCTGATCGTGGCCAAGGGAGGAAGAGGACATAGGGGCGGATGCGGCGCCACCGGGTGTTTGGTGGACCTGAACGAGGCGTGCCCGGCGGATCTTCGGGTGGCGCGTGGGAATGAGACCGGTGGTGGTCAGGGTGATAGCGTGGCTTGCAGAAGCGCGTGTGAGGCTTTTGGGGATCCGCAGTATTGTTGCAGTGACGCGTACTCCACTCCCGACACGTGTCGTCCTTCTGTATATTCGCAATTCTTCAAGCAGGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAAACTAGCACTTACACGTGTGCATCCGGCTCGGCTAAATACTTGATCATATTCTGTCCCTTACCCTACACCAGCCAAAAGCTATTGGGAACAATAAAAGATGGTGCAACACTGCCTCTGGTAAACAAGACGATGATGTACTTATCAAGGCACCATTCAGGGGGTTCTTCATCAACAGGTCTGACTATTCTTAACCAAATGCAGATTGTGGCTCATACGGTCTCTCTTGCAACAGCATTTTTCTTGTTCTGCCCTCTTTTTCATCCTTTATAA 969 0.5449 MGRLLLLLTFLALSFVSEVQSASFKIVNKCRHTIWPGFLSGATSPPLPTTGFVLKSGKSKTIKIPKSWSGRIWARTLCGVDSDGKFSCLTADCGSGKVECVGGAKPPASLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKGGRGHRGGCGATGCLVDLNEACPADLRVARGNETGGGQGDSVACRSACEAFGDPQYCCSDAYSTPDTCRPSVYSQFFKQACPRAYSYAYDDKTSTYTCASGSAKYLIIFCPLPYTSQKLLGTIKDGATLPLVNKTMMYLSRHHSGGSSSTGLTILNQMQIVAHTVSLATAFFLFCPLFHPL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4109 322 SMART tha2 24 252 IPR001938 -
Bisa01g4109 322 CDD TLP-PA 23 251 - -
Bisa01g4109 322 ProSiteProfiles Thaumatin family profile. 21 252 IPR001938 -
Bisa01g4109 322 Pfam Thaumatin family 28 252 IPR001938 -
Bisa01g4109 322 FunFam THAUMATIN-LIKE PROTEIN 1 22 252 - -
Bisa01g4109 322 ProSitePatterns Thaumatin family signature. 84 100 IPR017949 -
Bisa01g4109 322 Gene3D Thaumatin 22 252 IPR037176 -
Bisa01g4109 322 PRINTS Pathogenesis-related protein signature 23 35 IPR001938 -
Bisa01g4109 322 PRINTS Pathogenesis-related protein signature 71 82 IPR001938 -
Bisa01g4109 322 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Bisa01g4109 322 PRINTS Pathogenesis-related protein signature 84 113 IPR001938 -
Bisa01g4109 322 PANTHER OS03G0233200 PROTEIN 8 252 IPR001938 -
Bisa01g4109 322 SUPERFAMILY Osmotin, thaumatin-like protein 23 252 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4109 Bisa-ChrBisa01 98701555 98706800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4109 6 269 Receptor kinase-like Gene Family AT5G38280 47.940 7.72e-82 259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g4109 01 98701555 98706800 Bisa01g4109 01 98701555 98706800 ECH
Bisa01g4109 01 98701555 98706800 Bisa01g4110 01 98715570 98717849 ECH
Bisa01g4109 01 98701555 98706800 Bisa11g1803 11 39811454 39812597 ECH