Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4110 ATGGAAGACGCCTTCTCCTTCATCCTCATCTCCTCTCTGTTTCTCCTCATTCCCTCAGGTGTTCATGCCACCACATTCACGTTCGTCAACAAGTGCGACTACGCCATCTGGCCTGGAGTTCTCGCAAATGCCGGAAGCGGAAGCCTCGGCACCACCGGATTCGAGCTCCCCAAAGGCTCTTCCCGCTCCTTCCTAGCTCCGACCGGCTGGTCCGGCCGCTTCTGGGGCCGAACCGGTTGCAACTTCGACGGATCTGGTTCGTGTCTCACCGGAGACTGCGGCTCCGGCAAGCTCGAATGTAACGGCGCCGGCGCGTCGCCGCCTGTTACACTAGCCGAGTTCACTCTCGGCAGCACCGGCGGGCAAGATTTCTACGACGTGAGTCTGGTGGACGGGTACAATGTGCCGATGATCGTGGAGGGCTCCGGCGGGTCGGGTCAGTGTGCTTCGACCGGGTGCACGTCGGATCTGAATCAGAAGTGCCCGGAGGAGCTAAGAGTGGGGGACGGAGACGCGTGCAAGAGCGCGTGCGAGGCTTTTAACAGTCCGGAGTACTGTTGCAGCGGCGCGTACAGTACGCCGTCGACGTGCCGGCCGTCGGTGTATTCGGAGATGTTCAAGGCAGCGTGCCCGAGATCGTATAGCTACGCATACGATGATGCTACGAGTACGTTTACTTGTACGGGGGCAGATTATACGGTGACGTTTTGCCCGTCCTCTCCAAGTCAGAAATCTTCACAAGATTCCGTCCCCATGACCTCAACACCAACACCACCAACACCACCAACAACCACAACAACCCCACCCGGATCCGCGTCCGACCCCAGCTCCACTTATGGCTCCGGATCAGAATTTGGCTCCGGTTATGGATTTGGGGCCACTCCCACAGGTGTAGCTACAGCTACAGGCACAGGCACGGGCATGGATATGGATTCGGGTGTTGGATATATGGTTACGAGTTCAGGGTCAGGGTCGAGTGCCGGATCCGGTGAAGCCGTGCTAGCCGATAGCTCATATATGGCTGGTTTAGCCATGGGAGGCTCACCCAGCTTAGTCCTCTTATCTTCTCTACAATCTGCATTAGTCTACATTTTTTGCTTTTTGCTTATTCTATTTTCCTAG 1122 0.5686 MEDAFSFILISSLFLLIPSGVHATTFTFVNKCDYAIWPGVLANAGSGSLGTTGFELPKGSSRSFLAPTGWSGRFWGRTGCNFDGSGSCLTGDCGSGKLECNGAGASPPVTLAEFTLGSTGGQDFYDVSLVDGYNVPMIVEGSGGSGQCASTGCTSDLNQKCPEELRVGDGDACKSACEAFNSPEYCCSGAYSTPSTCRPSVYSEMFKAACPRSYSYAYDDATSTFTCTGADYTVTFCPSSPSQKSSQDSVPMTSTPTPPTPPTTTTTPPGSASDPSSTYGSGSEFGSGYGFGATPTGVATATGTGTGMDMDSGVGYMVTSSGSGSSAGSGEAVLADSSYMAGLAMGGSPSLVLLSSLQSALVYIFCFLLILFS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4110 373 Gene3D Thaumatin 24 238 IPR037176 -
Bisa01g4110 373 SUPERFAMILY Osmotin, thaumatin-like protein 24 239 IPR037176 -
Bisa01g4110 373 FunFam THAUMATIN-LIKE PROTEIN 1 24 238 - -
Bisa01g4110 373 ProSiteProfiles Thaumatin family profile. 23 238 IPR001938 -
Bisa01g4110 373 MobiDBLite consensus disorder prediction 254 268 - -
Bisa01g4110 373 ProSitePatterns Thaumatin family signature. 84 100 IPR017949 -
Bisa01g4110 373 SMART tha2 26 238 IPR001938 -
Bisa01g4110 373 PRINTS Pathogenesis-related protein signature 228 237 IPR001938 -
Bisa01g4110 373 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Bisa01g4110 373 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Bisa01g4110 373 PRINTS Pathogenesis-related protein signature 123 139 IPR001938 -
Bisa01g4110 373 MobiDBLite consensus disorder prediction 241 282 - -
Bisa01g4110 373 CDD TLP-PA 25 237 - -
Bisa01g4110 373 PANTHER OS03G0233200 PROTEIN 11 238 IPR001938 -
Bisa01g4110 373 Pfam Thaumatin family 30 238 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4110 Bisa-ChrBisa01 98715570 98717849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4110 4 247 Receptor kinase-like Gene Family AT5G38280 48.837 1.47e-77 250
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g4110 01 98715570 98717849 Bisa01g4110 01 98715570 98717849 ECH
Bisa01g4110 01 98715570 98717849 Bisa11g1803 11 39811454 39812597 ECH
Bisa01g4109 01 98701555 98706800 Bisa01g4110 01 98715570 98717849 ECH