Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00252 ATGGTTGTAAAGAGGAGTGATGATGAAGAATCATTGTTTGAGACAACCAAATCAAGAGGGAGCTTCCTATATAGGGTGTTCTCAGTGTCTTTATTTGTAGCCATGTGCTTTGTCTATGCTTACAGGTTGACCCAGATACCCACCGGTGGAGAAGACCACGGCGGCGGCGAAGATTACTACTATGGGACATGGACTTGGCTCGGGTTGCTTGCGGCGGAGCTGTGGTTCGGCCTCTACTGGGTCTTGGCTCAAGCCTTCCGGTGGAACTTAGTGTTTAGGAAAACCTTCAAGAACAGATTCTCTCAAAGATATGAAGAAAGCAAGTTACCAAAAGTGGACATATTTGTGTGCACAGCAGATCCAGATATTGAGCCACCAATAATGGTGATCAACACAGTCTTGTCTCTTATGGCTTATGACTATCCTTCTGAGAAGCTGAGTGTTTATCTCTCTGATGATGCTGCTTCTGAACTCACTTTCTATGCTCTTTTGGAAGCTTCTCTCTTTGCCAAGCATTGGTTACCTTTCTGCAAGAAATTCAATGTTCAGCCTAGGTCTCCAGCTGCTTATTTTAATAATATCCTTCTTCACCATAATCATGCTACTAAAGAATTCGCAAACATTAAGAAATTATACGATGAGATGAAAAAGAGAATTGAAGATGCAACTAAGTTGGGAAGAGTAGCGAGTGAAGAACGCTCTAAGCATAGTGGATTTTTCCAGTGGAATTCGTATTCTTCTCGACGTGACCATGACACAATTCTTCAAATAATACTGCATAAGAAGGAGCCTCATAATTCTAAAGATGAAGATGGGAATTATTTGCCAACTCTTATGTATTTGGCTCGTGAGAAGAGACCCCAACATCATCACAATTTCAAAGCTGGAGCCATGAACTCCTTGCTAAGGGTGTCATCAGTGATTAGCAATGCAAAGATCGTTCTAAATGTAGATTGTGACATGTACTCAAACAGTTCAGAATCAGTGAGGGATGCTCTTTGCTTTTTGATGGATGAAGAGAAAGGCCATGAAATTGCTTTTGTGCAGTTCCCTCAGAACTTTGACAACATTCTCAAGCATGACATATACAGCAGCACTCTATTAACATTAATTGATGTGGAGATGCATGGTGCGGATGGTTATGATGGTCCTTTGTACATTGGAACATGCTGCTTTCATAGAAGAGATGCTCTATGTGGGATGAAGTTCAGTAATAGATACAAGAATGACTTATTAAGGAGTGAGAGAGACAATTGCATAGAAGTAAACTTGAATGAATTAGAAGTAAAATCAAAGGCTCTAGCAAGTTGCACCTATGAAGAAAACACACTTTGGGGAAAAGAGATGGGTGTGATATATGGGTGTCTAGTGGAGGATGTGATGACAGGACTGTGTATACATTTACAAGGATGGAAATCAGTGTACTATAGCCCACCAAGGAAGGCTTTCTATGGTGTTGCTCCAACCACCTTGCTTCAAGCACTTGTTCAGCACAAGAGATGGGCTGAAGGAGAACTTCAAATTCTTCTTTCTAAGCATTGTCCAGCATTCTATGGCCATGGAAGGATCAACTTAGCCCTACAAATGGGATATTCTTACTACAATTGTTGGGCACTCACCTCCTTATCAAAGCTATGTTACTCCATCATCCCTTCACTCTATCTCCTTAGAGGCATTCCCTTGTTTCCAAAGATGTCTAGCATATGGTTCATACCTTTTGCATATGTAATAGTGGGTGAAAGTGCTCGCAGTTTGTTGGAGTTTGTGTTATTTGGAAGCACAATCCAAGGTTGGTGGAATGACCTAAGGATGGTGCTGTACAAGGGAACAAGCTCTTACCTATTTGCTCTCATAGACAGCATCTCCAAGTTATTTGGCCTTCCAGATTCTCCCTTTACAGTCACAGCTAAGGTCATGGAGGAAGATGTTTCCGAACGATACGAGAAACAAGTTATGGAGTTTGGAGCAGCTTCTCCATTGTTCACTGTATTGGCAACAATTGCATTGCTCAATTTGTTCTGTTTACTTGGCATTTTGAAGGAGTTAGCCCTTTGTGAAGACTGGTTTGAAACTTATAAGAAAATGTCCTTGCAAATTCTGTTGTGTGGGTTCTTGGTACTTATCAATATTCCTATATACCAAGGACTTTTCTTAAGGAAGGATAAGGGCAGATTGCCAAGCTCTATTGCCATTAAATCAACAGTATTGGCTCTAAGCACATGCATCCTCTTCAACATGTTGAAAGATTAA 2250 0.4098 MVVKRSDDEESLFETTKSRGSFLYRVFSVSLFVAMCFVYAYRLTQIPTGGEDHGGGEDYYYGTWTWLGLLAAELWFGLYWVLAQAFRWNLVFRKTFKNRFSQRYEESKLPKVDIFVCTADPDIEPPIMVINTVLSLMAYDYPSEKLSVYLSDDAASELTFYALLEASLFAKHWLPFCKKFNVQPRSPAAYFNNILLHHNHATKEFANIKKLYDEMKKRIEDATKLGRVASEERSKHSGFFQWNSYSSRRDHDTILQIILHKKEPHNSKDEDGNYLPTLMYLAREKRPQHHHNFKAGAMNSLLRVSSVISNAKIVLNVDCDMYSNSSESVRDALCFLMDEEKGHEIAFVQFPQNFDNILKHDIYSSTLLTLIDVEMHGADGYDGPLYIGTCCFHRRDALCGMKFSNRYKNDLLRSERDNCIEVNLNELEVKSKALASCTYEENTLWGKEMGVIYGCLVEDVMTGLCIHLQGWKSVYYSPPRKAFYGVAPTTLLQALVQHKRWAEGELQILLSKHCPAFYGHGRINLALQMGYSYYNCWALTSLSKLCYSIIPSLYLLRGIPLFPKMSSIWFIPFAYVIVGESARSLLEFVLFGSTIQGWWNDLRMVLYKGTSSYLFALIDSISKLFGLPDSPFTVTAKVMEEDVSERYEKQVMEFGAASPLFTVLATIALLNLFCLLGILKELALCEDWFETYKKMSLQILLCGFLVLINIPIYQGLFLRKDKGRLPSSIAIKSTVLALSTCILFNMLKD 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00252 749 SUPERFAMILY Nucleotide-diphospho-sugar transferases 122 513 IPR029044 -
Arst7g00252 749 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 250 407 IPR029044 -
Arst7g00252 749 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 100 207 IPR029044 -
Arst7g00252 749 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 11 735 - -
Arst7g00252 749 Pfam Cellulose synthase 112 419 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst7g00252 749 Pfam Cellulose synthase 433 746 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst7g00252 749 Coils Coil 205 225 - -
Arst7g00252 749 FunFam Cellulose synthase isolog 101 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00252 Arst-Chr7 1596266 1614899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00252 8 747 Glycosyltransferase AT1G55850 53.369 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00252 - - gmx:100815825 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00252 7 1596266 1614899 Arst7g00252 7 1596266 1614899 ECH
Arst7g00252 7 1596266 1614899 Arst3g01456 3 13084259 13100061 PCT
Arst1g00419 1 3826316 3840091 Arst7g00252 7 1596266 1614899 PCT