Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00419 ATGGGCAAGAATGAAGAGTCTCATCCATTGTTCGAAACAAGGAGAGCCAAAGGAATATTCATTCATAGAATATTCTCCTTCTCCATGTTTTTGGGAATTTTGTTCATCTGGGTTTACAGAGTGAGTTACATGCCAAGAAAAAGTAGTGAAGATGGGAAATGGGTTTGGTTTGGAATGTTTTTATGTGAGCTATGGTTTGGTCTTTATTGGCTCATGAGGCTTTCACTCAGATGGAACCCTGTTTTCCGACAACCCTTCCCCCACACACTCTCCCAAAGATATGATGATGATAAGTTGCCAGGAGTGGACATATATGTGTGTACGGCAGATCCAGAAATAGAACCACCAATGATGGTGATTAACACAGTTCTCTCTGTTATGGCTTATGACTATCCAACTCATAAGCTTAGTGTCTATCTCTCTGATGATGGAGGTTCAGATATTACTTTCTATGCTCTCTTAGAGGCATCTAATTTTGCTAAGCATTGGTTGCCATTTTGCAAGAAGTTCAATGTTGAACCAAGGTCACCGGCAGCATATTTCAAGAGTGTTTCCTCAACTACTTACTCAAATGATTCTATAAATGCCAAAGAGTTGGTCACCATCAAGAAATTGTATGAAGATATGGAAAGTATAATAGAAAATGCAAGCAAGGTGGGTGAAGTAGCTGAGGAAATCCGCTCCAAACACAAGGGATTTTCTCAGTGGAATTCATTCTCTTCTCGAAGGGATCATGATGCAATTATTCAAATTTTACTTCATGGGAAAGACTCGAGCGCAAAAGATATAGATGGAATCGTTTTGCCAACATTGGTATATTTATCTCGCGAGAAGAGGCCCCATGTTGCACATAACTTCAAAGCTGGAGCCATGAATTCACTGATAAGGGTGTCATCAATTATTAGCAATGGGAAAATTATTCTTAATGTAGATTGCGACATGTACGCAAACAATGCACAATCTCTAAAGGAAGCACTTTGCTTTCTCATTGATGAAGAAAAAGGCCATGAAATCGCTTTTGTACAAACGCCACAGGGCTTTGAGAATCTTACAAAAAATGATATCTATGGCGGTGCTCTTAGAGTTATTTATGAGTGGGAATTCCCTGGCATGGATGGATTTGGTGGACCTATGTATATTGGATCTGGTTGCTTTCATAAGAGGGATACACTCTGTGGAAAAAAGTTTAATGATCAAGAAAGCTTGAAGCATTGGAATGGTGAAGATATAAACAATGACCAATCAATGACAAAAACAAGCTTGCATCTATTGGAACAAAAGTCAAAGGCTCTTTTAAGTTGCACTTATGAGAATAACACACTATGGGGAAAAGAGATGGGACTACTATATGGTTGTGCAGTGGAGGATGTTATAACTGGTTTAGCTATACAATGTCGAGGGTGGAAATCAGTGTACTATAATCCAAAAAGGAAAGCTTTCTTAGGAGTATCTCCAACCACATTGCCAGAAGCATTAGTTCAACATAAGAGATGGTCTGAAGGAGGATTCCAAATTCTGCTCTCTAAGTATAGTGCTGCATGGTGTGCTTATGGATTAATCAGCCCAGGACTTCAAATCACATATTGTTTTTACAATCTTTGGGTCCTTAATTGCTTGCCAACTCTTTATTACTCAATTTTCCCTTCACTTTGTCTCCTCAAAGGGATTTCCTTGTTTCCACAGATGTCAAGTCCATGGTTCATACCATATGCATATGTCACACTTGGTGAAAATACTCAATGCTTGTTGGAATTTTTGTGGTCAGAAGGCACAATAAAAGGTTATTGGAATGACCTAAGGATGTGGCTTTACAAGAGAACAAGCTCATACTTATTTGCCTTGATTGATACCATCTTCAAGTCTCTAGGGTTTTCAAGTTTAGCCTTTGTGATCTCAGCTAAGGTAGCTGAAGAAAATGTTTCTCAAAGATATAAGAAGGAGATAATGGAGTTTGGAAACTCTTCCCCAATGCTCACTCTTCTTGCAACACTAGCATTGTTCAATTTGTTTTGTCTTGTTGGTGCCTTATTCAAAGGTGGTCTTGGAATGTTGATGGTGTTGCCATTGCAAGTTCTACTAAGTGTGGTGTTGGTTCTCATCAATTTGCCTTTGTATGAAGGCCTCTTTCTAAGGAAGGACAAGGGAAGATTTCCAACCTCTGTTGTGTTTAAATCAATGGCAGTTGCTCTAAGTGCTTGTGTTCTATCAAATGTGAATGTCTTCACTACAATTTAG 2235 0.3884 MGKNEESHPLFETRRAKGIFIHRIFSFSMFLGILFIWVYRVSYMPRKSSEDGKWVWFGMFLCELWFGLYWLMRLSLRWNPVFRQPFPHTLSQRYDDDKLPGVDIYVCTADPEIEPPMMVINTVLSVMAYDYPTHKLSVYLSDDGGSDITFYALLEASNFAKHWLPFCKKFNVEPRSPAAYFKSVSSTTYSNDSINAKELVTIKKLYEDMESIIENASKVGEVAEEIRSKHKGFSQWNSFSSRRDHDAIIQILLHGKDSSAKDIDGIVLPTLVYLSREKRPHVAHNFKAGAMNSLIRVSSIISNGKIILNVDCDMYANNAQSLKEALCFLIDEEKGHEIAFVQTPQGFENLTKNDIYGGALRVIYEWEFPGMDGFGGPMYIGSGCFHKRDTLCGKKFNDQESLKHWNGEDINNDQSMTKTSLHLLEQKSKALLSCTYENNTLWGKEMGLLYGCAVEDVITGLAIQCRGWKSVYYNPKRKAFLGVSPTTLPEALVQHKRWSEGGFQILLSKYSAAWCAYGLISPGLQITYCFYNLWVLNCLPTLYYSIFPSLCLLKGISLFPQMSSPWFIPYAYVTLGENTQCLLEFLWSEGTIKGYWNDLRMWLYKRTSSYLFALIDTIFKSLGFSSLAFVISAKVAEENVSQRYKKEIMEFGNSSPMLTLLATLALFNLFCLVGALFKGGLGMLMVLPLQVLLSVVLVLINLPLYEGLFLRKDKGRFPTSVVFKSMAVALSACVLSNVNVFTTI 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00419 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 185 IPR029044 -
Arst1g00419 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 261 431 IPR029044 -
Arst1g00419 744 Pfam Cellulose synthase 426 733 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst1g00419 744 Pfam Cellulose synthase 102 401 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst1g00419 744 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 8 723 - -
Arst1g00419 744 FunFam Cellulose synthase isolog 91 189 - -
Arst1g00419 744 SUPERFAMILY Nucleotide-diphospho-sugar transferases 117 555 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00419 Arst-Chr1 3826316 3840091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00419 6 733 Glycosyltransferase AT1G55850 55.116 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00419 - - gmx:100785532 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00419 1 3826316 3840091 Arst1g00419 1 3826316 3840091 ECH
Arst1g00419 1 3826316 3840091 Arst7g00252 7 1596266 1614899 PCT