Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01456 ATGACAAACCAAACATCTCTTCCCTTCTATGAAAAACATAGGTTCAAATACAATTTCAAAAGAGTAATAGATGTCTTGATCTTAATCCTGCTACTACTTCTACTTGGCTACCGAGTTATCTCTTTGGTCAACAACTACCGTTTCCATTGGCTTGTTGTTTTGATATGCGAATCATGGTTTACCTTAGGTTGGATTTTCACCATCACCACACAGTGGAATCCTGCTACTATTAAAACATATCCAGAACGCCTCTTACAAAGGTTGCAATTGCAAGAGCTTCCGGCGGTTGATTTGTTTGTGACAACAGCAGATCCGGTGCTAGAACCGCCGATAATGACAGTGAACACAGTTTTGTCATTGTTGGCAATGGAATACCCAAGTGACAAGCTAGCATGTTATGTTTCAGATGATGCGTGTTCCCCTCTCACCTTCTACGCTCTTCAAGAAGCTTCTAAATTTGCCAAACATTGGGTTCCTTTCTGTAAGAAATTTAATGTCCAAGTTAGAGCTCCATTTAAATACTTCTCTCATGTGGCTTATGATCATGACTTATCAACACAACAATTCAAACAAGAATGCCTAAGGATGAAGGACATGTATGATAATCTTAGCCGCAGAATAGAAGAAGCTTGCCGAACATCAATTCCATCTTGCCGACTTGATGGAGATTTTGCAGTTTTCTTAAACACCCAAAGGGATAATCATCCCACCATAATCAAGATCATATGGGAGAATAAGGAAAAGCATTCATCAGAAGGGTTGCCACATTTGATCTACATATCAAGAGAGAAAAAGCCAAAGCATCCACATCATTACAAAGCCGGTGCCATGAATGCTTTGACAAAAGTGTCCGGTTTGATGACAAATGCTCCGTTTATTCTGAACGTGGACTGTGACATGTTTGTAAACAATCCAAAGATTGCATTACATGGGATGTGTGTTTTGCTTGATCCTAAGGGGCAAAAAGAAGTTGCATTTGTTCAGTGTCCCCAACAATTTTATGGTAAATTGAAGAATGATCCTCTTGGAAATCAAATGGTGGTTCTCTTTAAGTACGTGGCAAGTGGATTAGCAGGGCTTCAAGGACCTTTTTATGGAGGAACAAACTGCTTCCATAGAAGAAAAGTTATCTATGGTCTTTCGCCAGATGAAGCAGAAAAAGGAAACATGTCAGAGAAGAAGCTAAAACAAGAATTTGGTGCTTCAAAAGAGCTTGTGAAATCAGCTGCTGATGTTTTGGAAGGAAGAACATATTCTCCTAATCATGATATCAATATTTCCAAATCACTTGAGTCAGCAAATCAAGTTGCTAGCTGTGGATATGAATATGCCACTGGCTGGGGAGATCAGATTGGTTGGAAATATGGATCAATAACAGAAGATGTTCTAACTGGACTGTCAATCCATAAAAAGGGTTGGAGATCTGAATTCTGCACACCAGAGCCAATTGCATTCACAGGCTGTGCACCAATTGGGCTTCCAACATCAATGGGCCAACAGAAAAGATGGGCCACTGGAATGATTGAGATCTTCTTTAATAAGAAGTATAGTCCACTTGTTTGCACCATTTTTGGCAAATTACATTTTAGGCAATTCTTGGCTTATATGTGGATTATGAATTGGGGCTTCCAACCAATTTTTGAAGCCTCCTATGTTTGTCTCCTTACCTATTGCATCATCACCAACTCCAACTTCATGCCTCAGGGACCAGCCCTATCAATTCCTATTACTCTTGTTGTAATTTATATGCTACATACAATATTAGAGTACTTGGCAACAAAGCTATCAATCCAAGAGTGGTGGAACAATCAAAGAATGTCAAGAATATACATCATGAATGCTAGGTTCAGTGGATTTCTTGCCCTGATTCTTAAGCTTCTAAGAATATCCAACACTGTCTTTGACATTACAAGGAAAGATCAAAATTTCTCTAGTGATGATGGTGAAGATTGCTTAGATAATAACAATAATGATGATGCTGGTACCTTCACATTTGATGAATCCTCAGTTTTTGTTCCAGGAACTACTATTTTGCTAATGCAATTGGCAGCAATGGTCATCAAAATTATTGGATTAGTGGGATCAAGGAGTGGGAATAATAATAATAATAATAATAATAATAAAATTAATAATAAGAATAATGGGTATGGATCAGTATGTGACATGTTATGTAGTTTGTATTTGATTCTTTGCTATTGGCCATTTTTGAGAGGGATATTTAGAAGGGGCAAATATGGAATTCCATTTTCCACAATTTTCAAGTCAGCAACACTGGCATTTCTTTTTGTGAGTCTATGTACACAGACCATTAGTGGTTAA 2319 0.3799 MTNQTSLPFYEKHRFKYNFKRVIDVLILILLLLLLGYRVISLVNNYRFHWLVVLICESWFTLGWIFTITTQWNPATIKTYPERLLQRLQLQELPAVDLFVTTADPVLEPPIMTVNTVLSLLAMEYPSDKLACYVSDDACSPLTFYALQEASKFAKHWVPFCKKFNVQVRAPFKYFSHVAYDHDLSTQQFKQECLRMKDMYDNLSRRIEEACRTSIPSCRLDGDFAVFLNTQRDNHPTIIKIIWENKEKHSSEGLPHLIYISREKKPKHPHHYKAGAMNALTKVSGLMTNAPFILNVDCDMFVNNPKIALHGMCVLLDPKGQKEVAFVQCPQQFYGKLKNDPLGNQMVVLFKYVASGLAGLQGPFYGGTNCFHRRKVIYGLSPDEAEKGNMSEKKLKQEFGASKELVKSAADVLEGRTYSPNHDINISKSLESANQVASCGYEYATGWGDQIGWKYGSITEDVLTGLSIHKKGWRSEFCTPEPIAFTGCAPIGLPTSMGQQKRWATGMIEIFFNKKYSPLVCTIFGKLHFRQFLAYMWIMNWGFQPIFEASYVCLLTYCIITNSNFMPQGPALSIPITLVVIYMLHTILEYLATKLSIQEWWNNQRMSRIYIMNARFSGFLALILKLLRISNTVFDITRKDQNFSSDDGEDCLDNNNNDDAGTFTFDESSVFVPGTTILLMQLAAMVIKIIGLVGSRSGNNNNNNNNNKINNKNNGYGSVCDMLCSLYLILCYWPFLRGIFRRGKYGIPFSTIFKSATLAFLFVSLCTQTISG 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01456 772 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 12 753 - -
Arst3g01456 772 Pfam Cellulose synthase 96 388 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst3g01456 772 Pfam Glycosyl transferase family group 2 437 576 IPR001173 -
Arst3g01456 772 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 542 IPR029044 -
Arst3g01456 772 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 196 387 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01456 Arst-Chr3 13084259 13100061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01456 8 763 Glycosyltransferase AT2G32530 44.330 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01456 - - aip:107632722 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01456 3 13084259 13100061 Arst3g01456 3 13084259 13100061 ECH
Arst7g00252 7 1596266 1614899 Arst3g01456 3 13084259 13100061 PCT
Arst3g01456 3 13084259 13100061 Arst7g00251 7 1596242 1614915 PCT