Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01366 ATGGGGATCAAAGAGGACGGGGAGGATGGTGTAGAGAAGAATGGAATCAGAGAGCCATTAATTTCTGACCATGCAAGCAACAAAGGACATCCATGGATGGTTTACTTCACAACATTGGTTGCTGTCTGTGGTTCCTATGAATTTGGAACTTGTGCTGGATATTCTTCTCCTACTCAAGATGCTATTAGAAGTGATCTTGGTCTGTCATTGGCAGAGTATTCTTTGTTTGGCTCCATCTTGACTTTCGGCGCCATGATTGGCGCCATAACAGCCGGACCGATTGCTGATTTGATTGGTCGAAAAGGGGCAATGAGGGTGTCAAGTGCCTTCTGTGTTGCAGGCTGGCTTGTCATTTTCTTTTCTGAGGGTCCAATACCTTTAGACATAGGGAGGCTAGCAACTGGATATGGAATGGGATCTTTTTCATATGTGGTTCCTGTCTTCATAGCAGAGATTGCACCAAAAGAACTCCGAGGTGCTCTCACTGCACTAAACCAGTTCATGATTTGTGGTGCAGTATCTGTTTCATTTGTAATTGGAAACGTACTCTCATGGAGGACTTTAGCTTTAATTGGCCTCATACCCACTGGTGTGTTGCTTTTGGGTCTTTTTATCATTCCAGAATCTCCTAGATGGCTGGCGAAGAGAGGGCGAGGAAAAGAATTCGAGACAGCATTGCAGACGCTTCGCGGAAAAGATGCTGATATATCTCAAGAGGCAGATGAAATCCAGGATTACATAACAAGTTTAGAACAGCTCCCAAAACCAAAGCTGCTGGAATTGTTTCAGACAAGATATTTGCGCTCTGTCACAATTGGAATAGGGCTTATGGTATGCCAGCAATTTGGTGGAATCAATGGAATTTGTTTCTATCTCAGCAGTATTTTTGAGCTAGCAGGATTTTCTGCATTTGCTGGAACAGTAATATATGCTTGCCTTCAGATTGTGATCACTGGCCTTGGTGCAGCTCTGATAGATAAAGCTGGCAGGAAGCCCCTATTACTGATCTCTGGAACTGGATTAGTAGCTGGTTGTATATTTACAGCAGCTGCATTCTACCTTAAGGTTCATGAAGTGGGATTGGGGGCAGTCCCTGCACTTGCTTTGATTGGCATACTGGTCTATATAGGATCATTTTCACTTGGAATGGGAGCAGTGCCTTGGGTTGTCATGTCTGAGATATTTCCTATCAACATAAAAGGGCTGGCAGGGAGTGTAGCTACATTAGTAAACTGGTTTGGTGCTTGGTTATGCTCTTATACCTTCAACTTTCTCATGAGTTGGAGCTCCTATGGTACCTTTATTGTTTATGGTGCAATCAATGCAGTGGCCATAGTGTTTATAATTGTAGTGGTGCCAGAAACTAAGGGGAAAAGCCTTGAAGAATTACAAGCTGCCATTAATGCGTAG 1410 0.4355 MGIKEDGEDGVEKNGIREPLISDHASNKGHPWMVYFTTLVAVCGSYEFGTCAGYSSPTQDAIRSDLGLSLAEYSLFGSILTFGAMIGAITAGPIADLIGRKGAMRVSSAFCVAGWLVIFFSEGPIPLDIGRLATGYGMGSFSYVVPVFIAEIAPKELRGALTALNQFMICGAVSVSFVIGNVLSWRTLALIGLIPTGVLLLGLFIIPESPRWLAKRGRGKEFETALQTLRGKDADISQEADEIQDYITSLEQLPKPKLLELFQTRYLRSVTIGIGLMVCQQFGGINGICFYLSSIFELAGFSAFAGTVIYACLQIVITGLGAALIDKAGRKPLLLISGTGLVAGCIFTAAAFYLKVHEVGLGAVPALALIGILVYIGSFSLGMGAVPWVVMSEIFPINIKGLAGSVATLVNWFGAWLCSYTFNFLMSWSSYGTFIVYGAINAVAIVFIIVVVPETKGKSLEELQAAINA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01366 469 CDD MFS_GLUT6_8_Class3_like 35 462 IPR044775 GO:0008643|GO:0051119
Arst6g01366 469 PRINTS Sugar transporter signature 392 404 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g01366 469 PRINTS Sugar transporter signature 128 147 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g01366 469 PRINTS Sugar transporter signature 280 290 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g01366 469 PRINTS Sugar transporter signature 369 390 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g01366 469 ProSiteProfiles Major facilitator superfamily (MFS) profile. 33 456 IPR020846 GO:0022857
Arst6g01366 469 PANTHER - 25 464 - -
Arst6g01366 469 SUPERFAMILY MFS general substrate transporter 28 463 IPR036259 -
Arst6g01366 469 FunFam sugar transporter ERD6-like 6 28 467 - -
Arst6g01366 469 ProSitePatterns Sugar transport proteins signature 1. 91 108 IPR005829 GO:0016020|GO:0022857|GO:0055085
Arst6g01366 469 NCBIfam sugar porter family MFS transporter 26 462 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g01366 469 ProSitePatterns Sugar transport proteins signature 1. 321 338 IPR005829 GO:0016020|GO:0022857|GO:0055085
Arst6g01366 469 Gene3D MFS general substrate transporter like domains 27 468 IPR036259 -
Arst6g01366 469 Pfam Sugar (and other) transporter 45 465 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01366 Arst-Chr6 12888168 12892177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01366 1 468 Organic Solute Cotransporters AT5G18840 58.455 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01366 K03444 - gmx:100785248 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01366 6 12888168 12892177 Arst6g00504 6 4522158 4526759 ECH
Arst6g01366 6 12888168 12892177 Arst6g01366 6 12888168 12892177 ECH
Arst6g01366 6 12888168 12892177 Arst6g00506 6 4526924 4531512 ECH