Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00506 ATGTTTTCTGTCATAACCTTAAAATTCTGTGTAGCTTCTTTGTGCAGGAGAGGTTGGTCAATCATGGAGGACAGTAAGAGCTTGGAACCAAGCCAATCATGGATTCCTTTGCTTTCCAACACTGAATCACAAGTTCATGGTGTTATTACCTGTGATAAACAGATGATGCAGAGTGAAACTTGTTCCATGCCAGCTACTCTCATACTCACCACCCTTGTTGCTGTCTTTGGTTCTTACGTTTTCGGATCTGCTGTTGGATATTCATCACCTGCTCAATCTGGAATCATGGATGAACTCACTCTCGAAGTTGCTGATTATTCATTTTTTGGTTCAATATTGACAATTGGAGCAATAATTGGTGCTTTTGTCAGTGGTAGAATAGCAGATTGTGTAGGACGTCGAGTTGCAATGGGATTTGCAGAGGTATTCTGCATCTTGGGATGGCTTGCAATAGCATTCTCCAATGTTGCCTGGTGGCTTTACATTGGAAGATTGTTGGTAGGGTGTGGGATGGGCCTTCTATCTTATGTGGTTCCAGTTTATGTAGCAGAAGTAACACCGAAGAATCTCCGAGGAGGATTCACCACGGTTCATCAGCTTATGATTTGTTGTGGGGTATCATTAACTTATCTTATTGGAGCATTCTTGAATTGGAGGATTTTGGCTCTGATAGGAATAATTCCTTGTAGTGCACAGGTTCTGAGTCTACCCTTCATTCCTGAGTCTCCTAGGTGGCTGGCAAAGGTTGGTCACTTGGCGGGGAGCGAAAATTCTTTACAGTGCCTTAGGGGAGAGAATGCCAATGTTTCTCAAGAGGCCACTGAAATTAGAGATTATACAGAAGCACTTCAGCAGCATTCAGAAGCTAGCATTATTGGATTATTTCAATTGCAGTATTTGAAGTCACTTACTGTAGGTGTTGGCCTAATGATACTGCAACAGTTTGGAGGGGTTAATGGCATTGTTTTTTATGCAGGTTCTATATTCATTTCTGCTGGGTTTTCAGCAAGTATTGGAACAATAGCAATTGTTGCTGTTCAGATTCCAATGACAATTTTGGGAGTACTTTTGATGGATAAATCCGGAAGACGACCACTTTTGCTGGTCTCTGCTTTGGGAACATGCTTCGGATGCTTACTTGTGGCCCTATCATTCCTTTTGCTGGACCTACATAAATGGAAAGATCTCAGTCCTATTCTTGCTCTTGCTGGTGTACTGGTATATACAGGATCTTTCTCTCTTGGCATGGGAGGAATTCCATGGGTTATAATGTCTGAGATATTTCCTATAAATGTAAAGGGGTCTGCTGGAAGCCTACTGACTTTAGTTAGTTGGTTATGCTCTTGGATTGTGTCATATGCCTTTAACTTCCTTATGAGTTGGACTTCAACAGGAACTTTCTTCATATTCTGTGGCATTTGTGGTTTCACTGTTGTATTTGTGGCAAAATTGGTACCAGAGACCAAGGGCCGTACACTAGAAGAAATTCAAGCATCTCTCAATCCATTTTCAACAAAGACATGA 1524 0.4154 MFSVITLKFCVASLCRRGWSIMEDSKSLEPSQSWIPLLSNTESQVHGVITCDKQMMQSETCSMPATLILTTLVAVFGSYVFGSAVGYSSPAQSGIMDELTLEVADYSFFGSILTIGAIIGAFVSGRIADCVGRRVAMGFAEVFCILGWLAIAFSNVAWWLYIGRLLVGCGMGLLSYVVPVYVAEVTPKNLRGGFTTVHQLMICCGVSLTYLIGAFLNWRILALIGIIPCSAQVLSLPFIPESPRWLAKVGHLAGSENSLQCLRGENANVSQEATEIRDYTEALQQHSEASIIGLFQLQYLKSLTVGVGLMILQQFGGVNGIVFYAGSIFISAGFSASIGTIAIVAVQIPMTILGVLLMDKSGRRPLLLVSALGTCFGCLLVALSFLLLDLHKWKDLSPILALAGVLVYTGSFSLGMGGIPWVIMSEIFPINVKGSAGSLLTLVSWLCSWIVSYAFNFLMSWTSTGTFFIFCGICGFTVVFVAKLVPETKGRTLEEIQASLNPFSTKT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00506 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 70 489 IPR020846 GO:0022857
Arst6g00506 507 ProSitePatterns Sugar transport proteins signature 1. 124 140 IPR005829 GO:0016020|GO:0022857|GO:0055085
Arst6g00506 507 PRINTS Sugar transporter signature 402 423 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00506 507 PRINTS Sugar transporter signature 313 323 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00506 507 PRINTS Sugar transporter signature 78 88 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00506 507 PRINTS Sugar transporter signature 425 437 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00506 507 PRINTS Sugar transporter signature 161 180 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00506 507 Pfam Sugar (and other) transporter 71 498 IPR005828 GO:0016020|GO:0022857|GO:0055085
Arst6g00506 507 SUPERFAMILY MFS general substrate transporter 71 497 IPR036259 -
Arst6g00506 507 CDD MFS_GLUT6_8_Class3_like 68 495 IPR044775 GO:0008643|GO:0051119
Arst6g00506 507 Gene3D MFS general substrate transporter like domains 60 501 IPR036259 -
Arst6g00506 507 FunFam sugar transporter ERD6-like 6 61 500 - -
Arst6g00506 507 NCBIfam sugar porter family MFS transporter 96 496 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00506 507 PANTHER - 65 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00506 Arst-Chr6 4526924 4531512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00506 73 431 Organic Solute Cotransporters AT1G54730 69.359 6.72e-173 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00506 K03444 - ahf:112805191 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01366 6 12888168 12892177 Arst6g00506 6 4526924 4531512 ECH
Arst6g00506 6 4526924 4531512 Arst6g00506 6 4526924 4531512 ECH