Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00504 ATGGAGCGTAACAGCACTACTTCTGAAACATGGCAATCATCGATCCCTCTTATTGTTCATAAGGCTAATAATAAGGGACCATCATCTTCATCTTCATCTTCATCTTCGATACCCACCGTTCTCATCCTTAGCACTCTTGTTGCTGTTCTTGGTTCTTATGTGTTTGGCTCTGCTGTGGGTTATTCATCCCCTTCACAATCTGGAATCATGCATGACCTCAATCTTGCTCTCGCCCAGTATTCCATTTTTGGTTCAATATTGACAATTGGAGCCATGATTGGTGCCATTCTCAGTGGTACAGTAGCAGATTATGTGGGTCGTCGACTTGCCATGGGATTTGCCGAGGTTTTCTGCATATTTGGATGGGTTGCCATATCATTCGCGAAGGATGCTTGGTGGCTTTACGTTGGAAGATTGTTTGTGGGATTTGGGATTGGTCTTCTATCTTATGTGGTACCGGTTTACGTAGCAGAGATAACACCCAAAAATCTTCGAGGGGGATTCACTACAGTTCATCAGTTGATGATATGTATTGGAATGTCATTAACTTACCTAATGGGAGCAAACTTGAATTGGCGGGTTGTTTCTCTAATAGGAACTATTCCGTGTCTTGTACAGCTTCTGAGCCTTCCCTTTATCCCTGATTCTCCTAGGTGGTTGTCAAAGGTTGATCGCGTGAAGGAGAGTGATTCTGCTTTGCAGCACCTTAGAGGGAAGAATGCCGATGTTTATCAAGAGGCCACTGAAATTAGAGAGTATATAGAAACACTTCAGCAGCAAACAGAAGCTAGCCTAGTTGGCTTATTTCAGTTGCAGTATTTGAAGTCACTTACTGTAGGAGTTGGATTGATGATACTGCAGCAGTTTGGAGGGATTAATGGCATTATTTTTTATGCAAATTCTATATTTATCTCTGCTGGCTTTTCGGAAAGTATTGGTACAGTAGCAATGGTCGTTGTTAAGATCCCAATGACAACTTTGGGAGTATTTTTGATGGATAAATCTGGTAGAAGACCTTTACTACTGGTCTCTGCAGTGGGAACCTGCTTAGGATGTTTTCTTGCTGCTCTATCATTCTTCTTGCAGGACTTACATAAATGGAAAGAACTCAGTCCAGTTTTGGCACTTGTTGGTGTACTGATATATGTAGGATCATACTCCATAGGGATGGGGGCGATTCCATGGGTTATAATGTCTGAGATATTTCCCATTAATGTGAAAGGCTCTGCTGGAAGCTTTGTGACCTTTGTTAACTGGTTGTGTTCTTGGATTGTCTCATATGCTTTTAACTTCCTCATGAGTTGGAGATTCTCCATATTCTCCGGCGTATGCGGGTTGACAGTTGTATTCGTTGCAAGATTAGTACCAGAGACAAAGGGGCGCACACTTGAACAAATTCAAGCTTCTTTGAATTCATATTCTACAAAGAAATGA 1434 0.4177 MERNSTTSETWQSSIPLIVHKANNKGPSSSSSSSSSIPTVLILSTLVAVLGSYVFGSAVGYSSPSQSGIMHDLNLALAQYSIFGSILTIGAMIGAILSGTVADYVGRRLAMGFAEVFCIFGWVAISFAKDAWWLYVGRLFVGFGIGLLSYVVPVYVAEITPKNLRGGFTTVHQLMICIGMSLTYLMGANLNWRVVSLIGTIPCLVQLLSLPFIPDSPRWLSKVDRVKESDSALQHLRGKNADVYQEATEIREYIETLQQQTEASLVGLFQLQYLKSLTVGVGLMILQQFGGINGIIFYANSIFISAGFSESIGTVAMVVVKIPMTTLGVFLMDKSGRRPLLLVSAVGTCLGCFLAALSFFLQDLHKWKELSPVLALVGVLIYVGSYSIGMGAIPWVIMSEIFPINVKGSAGSFVTFVNWLCSWIVSYAFNFLMSWSXFSIFSGVCGLTVVFVARLVPETKGRTLEQIQASLNSYSTKK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00504 478 PANTHER - 32 468 - -
Arst6g00504 478 CDD MFS_GLUT6_8_Class3_like 42 466 IPR044775 GO:0008643|GO:0051119
Arst6g00504 478 ProSitePatterns Sugar transport proteins signature 2. 140 165 IPR005829 GO:0016020|GO:0022857|GO:0055085
Arst6g00504 478 SUPERFAMILY MFS general substrate transporter 46 468 IPR036259 -
Arst6g00504 478 ProSiteProfiles Major facilitator superfamily (MFS) profile. 44 460 IPR020846 GO:0022857
Arst6g00504 478 Gene3D MFS general substrate transporter like domains 33 473 IPR036259 -
Arst6g00504 478 NCBIfam sugar porter family MFS transporter 75 467 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00504 478 ProSitePatterns Sugar transport proteins signature 1. 98 114 IPR005829 GO:0016020|GO:0022857|GO:0055085
Arst6g00504 478 PRINTS Sugar transporter signature 399 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00504 478 PRINTS Sugar transporter signature 52 62 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00504 478 PRINTS Sugar transporter signature 287 297 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00504 478 PRINTS Sugar transporter signature 376 397 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00504 478 PRINTS Sugar transporter signature 135 154 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst6g00504 478 Pfam Sugar (and other) transporter 46 469 IPR005828 GO:0016020|GO:0022857|GO:0055085
Arst6g00504 478 FunFam sugar transporter ERD6-like 6 35 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00504 Arst-Chr6 4522158 4526759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00504 1 472 Organic Solute Cotransporters AT5G18840 51.891 5.88e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00504 K03444 - ahf:112805191 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01366 6 12888168 12892177 Arst6g00504 6 4522158 4526759 ECH
Arst6g00504 6 4522158 4526759 Arst6g00504 6 4522158 4526759 ECH