Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00846 ATGGGGGATGTTTCCCAGGATGCCCTCAACAACCTCAAATCTCTCATGGATCAAGTTGAGGAGCCATTGCAGAGAACCTTTCAGAATGTTCATCAAGGATATGTGACCGAAACCTTAGTACGATTTCTGAAAGCAAGGGAGTGGAATGCTTCCAAGGCTCATAAAATGTTAGTTGATTCTCTAAATTGGAGAGTACAAAATGAGATTGACAACATTTTATCCAAACCAATAGTCCCGCCTGATTTATACAGATCAATTCGCGATTCACAACTAATAGGATTGTCAGGTTACTCAAGAGAGGGTCTTCCTGTCTTTGCAATTGGTGTTGGGCTTAGCACATTTGACAAAGCATCTGTTCATTATTATGTTCAGTCTCACATTCAGATCAATGAATATCGTGACCGTGTGGTCTTGCCTTCTTCATCAAAGAAACATGGACAACCTATTACCACATGTGTAAAGGTTTTGGATATGACTGGTCTGAAGTTCTCGGCCTTGAACCAAATTAAGTTGTTAACAATAATATCATCCATTGATGATCTGAACTACCCTGAGAAGACAAATACATATTACATTGTAAATGCCCCATATATATTTTCAGCATGTTGGAAGGTAGTGAAGCCACTTTTGCAAGAAAGGACAAGAAGAAAAGTGCAAGTCTTACCGGGTTGTGGGCGAGATGAGCTGTTGCAGATAATGGACGAGGCATCTTTACCACATTTCTGTAGAAAAGAAGGCTCCGGATCTTCCAGACGCTCAGAGGGCAGCAGTGAGAACTGCTATTCCTTAGATCATCCCTTCCACCAAGAACTCTACAATTACATCAAGGAGCAATCCAGGATCCATGAAAAGGTCGAACCCATCAAGCAGGGATCCTTCCATGTAGATTTCCCCGAGCCTCCAGCTGAGGAAGTAGAGATTGCCAAGACTATAGAGTCAGAGTTGCACAAGTTTGAGAACTGCAATGGAGTTTCAGATTCACTAGATGGCCTCAAAATCAATGGTGACTGA 1011 0.4194 MGDVSQDALNNLKSLMDQVEEPLQRTFQNVHQGYVTETLVRFLKAREWNASKAHKMLVDSLNWRVQNEIDNILSKPIVPPDLYRSIRDSQLIGLSGYSREGLPVFAIGVGLSTFDKASVHYYVQSHIQINEYRDRVVLPSSSKKHGQPITTCVKVLDMTGLKFSALNQIKLLTIISSIDDLNYPEKTNTYYIVNAPYIFSACWKVVKPLLQERTRRKVQVLPGCGRDELLQIMDEASLPHFCRKEGSGSSRRSEGSSENCYSLDHPFHQELYNYIKEQSRIHEKVEPIKQGSFHVDFPEPPAEEVEIAKTIESELHKFENCNGVSDSLDGLKINGD 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00846 336 CDD SEC14 86 241 IPR001251 -
Arst4g00846 336 SMART sec14_4 86 247 IPR001251 -
Arst4g00846 336 Pfam CRAL/TRIO domain 90 241 IPR001251 -
Arst4g00846 336 Pfam CRAL/TRIO, N-terminal domain 9 59 IPR011074 -
Arst4g00846 336 SUPERFAMILY CRAL/TRIO N-terminal domain 14 76 IPR036273 -
Arst4g00846 336 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 79 239 IPR001251 -
Arst4g00846 336 Gene3D - 1 289 IPR036865 -
Arst4g00846 336 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Arst4g00846 336 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 1 328 - -
Arst4g00846 336 SUPERFAMILY CRAL/TRIO domain 81 278 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00846 Arst-Chr4 6803752 6808889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00846 1 336 Acyl Lipid Metabolism Gene Families AT5G47730 72.807 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00846 K26544 - gmx:100793867 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00846 4 6803752 6808889 Arst4g00846 4 6803752 6808889 ECH
Arst1g03725 1 98576332 98579964 Arst4g00846 4 6803752 6808889 PCT
Arst1g00424 1 3910047 3913970 Arst4g00846 4 6803752 6808889 PCT