Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03725 ATGGGGCTTGTTCCTGAGGAAGCCGTCAAAGAGTTGCAAGCATCAATGGATCAAGTTGAGGAGCCATTGAAGAAAACATTCCAGAATGTTCATCAAGGATATGTCACTCAAACTCTAGTGCGATTTTTAAAAGCAAGAGAGTGGAATCCTTCCAAGGCCCATAAAATGTTGGTTGATTGTTTAAACTGGAGAGTTCAAAATGATATTGACAACATCTTATCTGTAATTCAATCAATTATTCCTCCTGATTTATACAGAGCAGTGCGTGATTCACAACTCATAGGTTTGTCAGGGTACTCAAGAGAGGGTCTTCCTGTCTTCGCAATTGGTGCTGGGCTTAGCACATTAGATAAAGCATCTGTTCATTATTATGTGCAGTCTCACATTCAAATTAATGAATATCGTGATCGAGTAATCTTGCCTTCTGCGTCGAAGAAGCATGGGCGGCCTATTACCAAATGTATAAAGGTTTTAGATATGACAGGATTGAAGCTGTCAGCCCTGAACCAGATTAAGTTGTTAACTATTATATCATCCATTGATGATCTGAACTACCCCGAGAAGACAGAAACTTATTACGTTGTAAATACCCCATACATATTTTCAGCTTGTTGGAAGGTTGTGAAGCCACTTTTACAAGAGAGGACAAAAAGAAAAGTGCAGGTGTTACCAGGCTGTGGGCGAGAGGAGTTGTTGAAGATCATGGATTACTCATCTCTGCCACACTTCTGCAAAAAAGAAGGCTCTGGATCATCCAAGCATTCAGGGAGAGGAAGTGAAAATTGCTATTCCTTGGATCACCCCTTTCACCAACAGCTCTACAGTTACATCAATCAGCAAGCCAGACTCCGTGAATCTGTTGAACCCATCAAGCAGGGATCCTTTCATGTAGATTTTCCGGAGCCGCCGGCCGAAGGTGAAGAAGCATCAATTGCCAAGACTTTAGAGTCAGAGTTACAGAAGTTTCATAATGGCAATGGAGTTTCAGACCTCAAAATCAATGATGACTAA 1011 0.4135 MGLVPEEAVKELQASMDQVEEPLKKTFQNVHQGYVTQTLVRFLKAREWNPSKAHKMLVDCLNWRVQNDIDNILSVIQSIIPPDLYRAVRDSQLIGLSGYSREGLPVFAIGAGLSTLDKASVHYYVQSHIQINEYRDRVILPSASKKHGRPITKCIKVLDMTGLKLSALNQIKLLTIISSIDDLNYPEKTETYYVVNTPYIFSACWKVVKPLLQERTKRKVQVLPGCGREELLKIMDYSSLPHFCKKEGSGSSKHSGRGSENCYSLDHPFHQQLYSYINQQARLRESVEPIKQGSFHVDFPEPPAEGEEASIAKTLESELQKFHNGNGVSDLKINDD 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03725 336 CDD SEC14 85 243 IPR001251 -
Arst1g03725 336 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Arst1g03725 336 SMART sec14_4 81 249 IPR001251 -
Arst1g03725 336 SUPERFAMILY CRAL/TRIO domain 83 274 IPR036865 -
Arst1g03725 336 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 241 IPR001251 -
Arst1g03725 336 Pfam CRAL/TRIO, N-terminal domain 9 59 IPR011074 -
Arst1g03725 336 Gene3D - 5 288 IPR036865 -
Arst1g03725 336 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 1 329 - -
Arst1g03725 336 Pfam CRAL/TRIO domain 92 243 IPR001251 -
Arst1g03725 336 SUPERFAMILY CRAL/TRIO N-terminal domain 12 72 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03725 Arst-Chr1 98576332 98579964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03725 1 335 Acyl Lipid Metabolism Gene Families AT5G47730 71.045 1.17e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03725 K26544 - gmx:547507 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03725 1 98576332 98579964 Arst4g00846 4 6803752 6808889 PCT