Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00424 ATGGGTATTTGCAACCAGGATGCAATCAAGCAGTTGCAATCCATGATGGAAAATGTGAATGAGCAGCAGAAGATCACATTCCAGAACATGCATCAGGGATATCCAACTGAAACACTAGCCAGATTTCTCAAAGCAAGGGACTGGAATGTTGCCAAAGCCCATAAAATGATAATCGATTGTTTACAATGGAGAGTTGAAAATGAGATTGACAATGTTTTATCAAAGCCAATCCCCGTAGATGTGTACAAAGCCGTGCGAGATTCTCAACTCATTGGAATGTCTGGTTACTCAAAGGAGGGCCTTCCTGTCATCGCTGTTGGTGTTGGGCTCAGCACATTTGACAAAGCTTCCGACAAATACTATGTGCAATCGCACATACAAATGAACGAATATAGGGATCGGGTGGTCTTGCCAACAGCTTCGAAGAAGCAAGGACGTTACATTGGCACTTGTGTGAAAGTCTTGGATATGACTGGTTTGAAAATTTCAGCGCTGAACCAACTGAGGCTTTTGACATCTATATCTACAATTGACGACCTGAACTACCCGGAAAAGACAGACACATATTATATTGTTAACGTGCCGTATGTATTCTCGGCGTGTTGGAAGGTTGTAAAGCCCCTTTTGCAAGAAAGAACGAGGAAGAAAGTTCAGGTGCTGCAAGGTTGTGGGAAGGAGGAATTACTCAAGGTAATGGACTATCAGTCTCTCCCACACTTCTGCAGAAAAGAAGGTTCCGGATCCTCGAAACACCGCGTAGCAGGAGACACTGAAAATTGCTTCTCCTTCGACAGCAGCTTCCACCAACAGCTCTACAACTTCATCAAGCAGCAAGCCGTCGTCATGCAAACCATATCACCAATCAGACAGGGATCCTTCTATGTTGACTTACCGGAGCCAGACCCCGACGACGCCAAGATTGCCAAGACCATCGAATCCGAGCTTCACAAGTTGGAAATTCAGAATGGTGTTGCGGTTAATGGACACTAA 990 0.4485 MGICNQDAIKQLQSMMENVNEQQKITFQNMHQGYPTETLARFLKARDWNVAKAHKMIIDCLQWRVENEIDNVLSKPIPVDVYKAVRDSQLIGMSGYSKEGLPVIAVGVGLSTFDKASDKYYVQSHIQMNEYRDRVVLPTASKKQGRYIGTCVKVLDMTGLKISALNQLRLLTSISTIDDLNYPEKTDTYYIVNVPYVFSACWKVVKPLLQERTRKKVQVLQGCGKEELLKVMDYQSLPHFCRKEGSGSSKHRVAGDTENCFSFDSSFHQQLYNFIKQQAVVMQTISPIRQGSFYVDLPEPDPDDAKIAKTIESELHKLEIQNGVAVNGH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00424 329 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 1 325 - -
Arst1g00424 329 Coils Coil 5 25 - -
Arst1g00424 329 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 238 IPR001251 -
Arst1g00424 329 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Arst1g00424 329 SUPERFAMILY CRAL/TRIO domain 81 240 IPR036865 -
Arst1g00424 329 Gene3D - 4 295 IPR036865 -
Arst1g00424 329 CDD SEC14 82 240 IPR001251 -
Arst1g00424 329 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Arst1g00424 329 SMART sec14_4 78 246 IPR001251 -
Arst1g00424 329 SUPERFAMILY CRAL/TRIO N-terminal domain 9 74 IPR036273 -
Arst1g00424 329 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00424 Arst-Chr1 3910047 3913970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00424 29 318 Acyl Lipid Metabolism Gene Families AT1G55840 70.447 1.10e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00424 K26544 - gmx:100817955 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00424 1 3910047 3913970 Arst4g00846 4 6803752 6808889 PCT