Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01917 ATGAGCAACGGGAAACTTTTTAGCATCGAATCTTTCGAGCTCAAGTTCCCCTTTGAGTTGAAGAAGCAGATCTCGTGCGCTCTCCAATTGTTCAATAAGACTGATAGCTATGTAGCTTTCAAGGTGAAAACAACTAATCCGAAGAAGTATTGTGTTCGTCCAAACACAGGAATTGTCTTGCCACGATCAACATGTGATATTATGGTTGCCATGCAGGCGCAAAAGGAAGCGCCACCTGATATGCAATGCAAGGATAAATTTCTTCTTCAGAGTGTGAAAACTTTTGACGGTGCTTCTACAAAAGATATCAATTCAGAAATGTTCAACAAAGAGGCAGGGCATTTGGTTGAGGAGTGTAAATTGAGAGTGGTGTATGTTTCTCCACCTCAACCACCATCTCCAGTCCCAGAAGGTTCCGAGGAAGGGTCATCGCCTAAAGGTTCTGTTTCAGAAAATGGGAATGTCAGTAGTGTTGACTTCACACAAGCATCAAGAGAATTTACTGAAAGATCCGATACTCAAGACAAATATGCAGAGGGAAGGGCTCTTATCACAAGATTGACTGAAGAAAAAAGTAATGCAATTCAACAGAACAACAAGTTCCATCAGGAACCGGATCTTCTGAAGCGTGAAGGCAATAAAAATCGCAGTGGAGTCTCCTTTATCATTATTGTATTAATTGGCTTACTTGGCATGATTATGGGGTATCTCATGAGGAAGACCTAA 726 0.4132 MSNGKLFSIESFELKFPFELKKQISCALQLFNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIMVAMQAQKEAPPDMQCKDKFLLQSVKTFDGASTKDINSEMFNKEAGHLVEECKLRVVYVSPPQPPSPVPEGSEEGSSPKGSVSENGNVSSVDFTQASREFTERSDTQDKYAEGRALITRLTEEKSNAIQQNNKFHQEPDLLKREGNKNRSGVSFIIIVLIGLLGMIMGYLMRKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01917 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Arst1g01917 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
Arst1g01917 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Arst1g01917 241 Coils Coil 184 204 - -
Arst1g01917 241 Pfam MSP (Major sperm protein) domain 13 110 IPR000535 -
Arst1g01917 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Arst1g01917 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 5 126 IPR000535 -
Arst1g01917 241 SUPERFAMILY PapD-like 3 141 IPR008962 -
Arst1g01917 241 MobiDBLite consensus disorder prediction 143 164 - -
Arst1g01917 241 MobiDBLite consensus disorder prediction 127 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01917 Arst-Chr1 37797159 37805745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01917 - - gmx:100527687 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01917 1 37797159 37805745 Arst1g01917 1 37797159 37805745 ECH
Arst5g01260 5 13443105 13446964 Arst1g01917 1 37797159 37805745 PCT
Arst1g01917 1 37797159 37805745 Arst5g00573 5 4783446 4786292 PCT