Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00573 GAGCTGGAGAAGCAATCATTTTGTGATCTTAAAGTTGTGAATAACACAGAGAACTATGTTGCTTTCAAGGTCAAGACTACTTCGCCAAAGAAGTACTTTGTACGGCCTAACACTGGTGTTATACAGCCCTGGGACTCGTGTATCATCAGAGTCACTCTTCAAGCCCAACGTGAATACCCTCCAGACATGCAATGCAAGGACAAGTTTCTACTACAGAGCACAGTAGTGAATCCAAATACTGATGTTGATGATCTTCCTGCAGATACTTTTAATAAGGAAAGTGGAAATACAATAGAAGAGTTGAAACTAAGAGTTGCGTATATTGCTTCTAACTTAACCCAAGGAAGCTCTGAAGATGATGCATTGAAGAACTCCGCACAAAAACTTGATAGTTCTTATGCTTTACAGCAGCTGAAGGAAGAAAGAGATGCCGCCCTGAGACAAACACGACAGCTGCAACAGGAACTGGACATGCTGAAAAGGCGAAAAAGCCAAAGAGGAGATCCTGGCTTTTCCCTTATCTTTGCCTTTTTTGTAGGTCTCATTGGACTTGTGCTTGGCTTTCTTTTAAAACTTCTATTCTCTTCACCACCACCATCACTATCACCATCTACGGAATGA 621 0.4171 MSTPAAASASPLISVSPDELRFPFELEKQSFCDLKVVNNTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTVVNPNTDVDDLPADTFNKESGNTIEELKLRVAYIASNLTQGSSEDDALKNSAQKLDSSYALQQLKEERDAALRQTRQLQQELDMLKRRKSQRGDPGFSLIFAFFVGLIGLVLGFLLKLLFSSPPPSLSPSTE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00573 230 Coils Coil 159 186 - -
Arst5g00573 230 SUPERFAMILY PapD-like 7 139 IPR008962 -
Arst5g00573 230 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 11 213 IPR016763 GO:0005789
Arst5g00573 230 PIRSF VAMP_assoc_prot 133 216 IPR016763 GO:0005789
Arst5g00573 230 PIRSF VAMP_assoc_prot 5 158 IPR016763 GO:0005789
Arst5g00573 230 FunFam Vesicle-associated protein 1-1 7 135 - -
Arst5g00573 230 Gene3D Immunoglobulins 6 135 IPR013783 -
Arst5g00573 230 ProSiteProfiles Major sperm protein (MSP) domain profile. 12 132 IPR000535 -
Arst5g00573 230 Pfam MSP (Major sperm protein) domain 13 116 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00573 Arst-Chr5 4783446 4786292 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00573 - - gmx:100794270 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01917 1 37797159 37805745 Arst5g00573 5 4783446 4786292 PCT