Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01260 ATGAGCACCGGCGAGCTTCTTAGCATCGAGCCTCTCGAGCTCAAGTTCTTCTTTGAGCTGAAGAAGCAGATCTCATGCTCTCTTCAATTGTCAAATAAGACCGATAGCTATGTTGCTTTCAAGGTGAAAACAACCAATCCTAAGAAATATTGTGTTCGTCCAAACACTGGAATTGTCATGCCGCGATCTACGTGTGATGTTACAGTTACCATGCAAGCGCAAAAGGAAGCTCCACCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAAAGCGTAAAAGCACCTGATGGAACAACTCCAAAGGATATCACTGCTGAAATGTTCAACAAGGAAGCAGGACATTTGGTTGAGGAGTGCAAATTGAGAGTGGTGTATCTGGCCCCAACTCAACCACCGTCTCCAGTCGCAGAAGGTTCTGAGGAAGGGTCATCACCTAGAGGCTCTATCTCTGAGAATGGAAATTTCACTGGTCCTGACTCCACACCAGTAACAAGGGCTTTTGCTGAACGATCAGATGTTCCAGAAAAATCTGCAGAGGCAAAAGCTCTTATTGCAAGGCTTACTGAAGAAAAGAATAATGCATTGCGACAAAATAGCAAGCTTAATCAGGAACTGGAGCTGCTGAAACGTGAAAGCAGCAAAAGTCGTGGGGGCGTCTCGATGGTCATTGTCATATTAATTGGTTTGCTTGGCATAATAATGGGGTATCTCATGAAAAAGGCCTAA 726 0.4421 MSTGELLSIEPLELKFFFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVMPRSTCDVTVTMQAQKEAPPDMQCKDKFLLQSVKAPDGTTPKDITAEMFNKEAGHLVEECKLRVVYLAPTQPPSPVAEGSEEGSSPRGSISENGNFTGPDSTPVTRAFAERSDVPEKSAEAKALIARLTEEKNNALRQNSKLNQELELLKRESSKSRGGVSMVIVILIGLLGIIMGYLMKKA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01260 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Arst5g01260 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Arst5g01260 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Arst5g01260 241 MobiDBLite consensus disorder prediction 143 161 - -
Arst5g01260 241 Coils Coil 177 211 - -
Arst5g01260 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
Arst5g01260 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Arst5g01260 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Arst5g01260 241 MobiDBLite consensus disorder prediction 130 163 - -
Arst5g01260 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01260 Arst-Chr5 13443105 13446964 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01260 - - gmx:100791280 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01260 5 13443105 13446964 Arst5g01260 5 13443105 13446964 ECH
Arst5g01260 5 13443105 13446964 Arst1g01917 1 37797159 37805745 PCT