Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01061 ATGCAATTGCAAAGCATGGTGGGGTATTGGAAAATGAGAAACATAAGGAGTTGTTCTTCTTCAGCTTCAGAGTCTCTCTTCTCATCTCTTCTTATTATTCTTCTTTGTTTCCATGGCACACTAGTTTGTTCCAAATACATAAAGTACAACACTGATGCTTCTATAAATGAAGGGAAATTGAATGTTCATTTGGTTGCACATTCCCATGATGATGTTGGTTGGTTGAAGACCATTGATCAATACTATGTTGGATCAAGAAACAACATTCAGGGTGCATGTGTTGAGAATGTGCTGGATTCGGTGGTTATGTCTCTTCAGAGAGATCCAAATAGAAAGTTTGTGTTTGCTGAGATGGCATTCTTTCATAGATGGTGGGTAGAACAGAGTCCAGAAATTAAAGAACAAGTGAGAAAGCTTGCGGATGCTGGCCAGCTTGAATTCGTGAATGGAGGATGGTGCATGCATGATGAAGCAGCACCACATTACATAGACATGATAGATCAAACAAGTTTGGGACATAGATTCATAAAACAAGAGTTCAACAAGACACCTCGTTCTGGTTGGCAAATTGACCCTTTTGGACACTCTGCTGTTCAAGCTTATCTTCTAGGTGCTGAGGTTGGTTTTGATTCAGTACACTTTGCTAGGATTGATTATCAAGACAGAGCAAAGCGCAAAGTTGATAAGTCACTTGAAGTTGTGTGGCGTGGTTCCAAAACATTTGGTTCTTCTGCTCAGATTTTTGCTAATGCTTTCCCTGTTCATTATAGTGCTCCAAACACTTTTAATTTTGAAGTCAATAATGAAAACTTGATCCCATTACAGGATGATCCTCTTCTTTTTGACACCAATATCATACAGCGTGTTGAAGATTTTGTTAATGCTGCTACTAGTCAAGCAAGTGTGACAAGGACAAACCATATAATGTGGACAATGGGTGATGATTTCCAATACCAATATGCTGAAAGTTGGTTCAAGCAAATGGATAAATTGATTCACTATGTTAATTTGGATGGGAGAGTGAATGCCTTGTATTCTACTCCATCTATTTACACTGATGCCAAAAATGCTGCTAATGAAACATTGCCATTGAAAACTGATGATTATTTCCCGTATGCTGATGGAGCAAATGGTTATTGGACAGGATACTACACGAGTCGCCCTGCCCTCAAGCGATATGTTAGGTCGCTAAGTGGATACTATTTGGCAGCACGGCAACTCGAGTTTTTGGCTGGAAAGAAATCTACAACTGGAAGTAATACATTTGACCTTGGAGAAGCTCTTGGAGTTGCACAACACCATGATGCTGTCTCTGGCACAGCCAAACAACATGTAACTGATGACTATGCTAAAAGACTTGCTATTGGAGCTTCTAAGGCTGAAAAAGTTTCTAGCACTTCTCTGGCTTGTCTTTCTGGCAAGAAATCAAGTGGTCACTGTTCAGCTCCTGCAACGGCATTTGCCCAGTGTCAATTACTCAACATCAGTTACTGCCCACAAACAGAGGACAATATTCCAGAGGCTAAGAGTTTGGTAGTAGTATTGTATAACCCACTTGGATGGAATCGTACTGAGATTGTTAGAATACCAGTTAATGATGATAATCTTGTTGTCAAAGATTCTTCTGGAAATATCATTGAAGCACAGTATGTGGACACAGATAATGTAACAAAAAATTTAAGAAGCTTCTATGTTGAGGCCTATTTAGGGGTGCAACCAAAAGAAGCACCAAAATATTCACTTCTGTTTCAAGTTTCAGTACCTCCACTTGGATGGAGTACCTACTTCATTTCGAAAGCATCTGGAAATGGTAAAAAAAGAAGTCCTTTCCTTTCACAGCTCATCAGCGGCGACACTGTTACCATAGGACCTGGGGATTTAAAGATGTCATTTTCTTCAACTTCTGGACAACTTCAACGGATGTTTAATTCCAAAACTGGAGTTGATATACCGGTTCAACAAAGCTATCTCTGGTATGCTTCTAGTGGAGGCAGCTTTCCTGATTATCAGGCTTCTGGTGCATACATATTCCGGCCTACTGAATCCCGGCCAACTGTTGTTTCAAGATCAATTCCCTACAAAGTAATCCGCGGGCCACTAGTTGATGAGATTCATCAAGAGTTTAACTCTTGGATTTACCAAGTTATTAGGCTTTACAAAGACAAAGACCATGCTGAAGTTGAATACACTGTTGGTCCAATTCCAACTGATGATGGAGTTGGAAAAGAGGTGATCACACAAATAACAGCAAATATGGCTACAAACAAGGAGTTTTATACTGATTCTAATGGCAGAGATTTTCTGAAAAGGGTTCGTGATTACAGAGAAGATTGGCCTCTTCAAGTTACTCAACCTGTGGCAGGAAACTACTATCCAATTAATCTTGGAATTTATGTTAAGGATCAGAAATCTGAACTCTCTGTCTTAGTTGATCGTGCCACGGGTGGAGCGAGCATTAGAGATGGAGAGATGGAACTAATGCTTCACAGGCGTATTCTCCAAGATGATGGTAGAGGAGTAGGAGAAGCTCTTGATGAAATAGATTGTGCAAAAGATTATGGATGTAAAGGACTAACGGTGAGAGGAAATTACTACCTTGGCATCCACAAGCTAGGATCTGGTTCCCGGTGGCGTCGGGCGACTGGTCAGGAGATTTACTCACCCCTCTTGTTGGCTTTCACATATGAGAGCTTGAAAAATTGGAAGTCATCTCATGTGACAAAAGGAACTGTCTTGGAGCCAAATTACAGCTTGCCTCCCAATGTTGCTCTGCTAACTCTTGAGGAGTTGGATGGTGGAAGTGTGCTTCTCCGTTTGGCACATCTCTATGAGCAAAGTGAAGATGCTGAGTATTCAACTCTGGCCAAAGTTGAATTGAAGAAGTTGTTTGCCAGAAAACAGATAAAAGAGTTGAAGGAGATGAGTTTATCAGCTAACCAAGAGAAATCAGAAATAAAGAAAATGAATTGGAATGTTGAAGGGGAGATTAATGGAAAAGAACCTAAACCACTTAGGGGTCGCCCTGTTAATACTTTCAATTTTGTTGTTGAGCTTGGTCCTATGGAAATACGTACATTCTTGCTGAAATTTTAG 3093 0.4032 MQLQSMVGYWKMRNIRSCSSSASESLFSSLLIILLCFHGTLVCSKYIKYNTDASINEGKLNVHLVAHSHDDVGWLKTIDQYYVGSRNNIQGACVENVLDSVVMSLQRDPNRKFVFAEMAFFHRWWVEQSPEIKEQVRKLADAGQLEFVNGGWCMHDEAAPHYIDMIDQTSLGHRFIKQEFNKTPRSGWQIDPFGHSAVQAYLLGAEVGFDSVHFARIDYQDRAKRKVDKSLEVVWRGSKTFGSSAQIFANAFPVHYSAPNTFNFEVNNENLIPLQDDPLLFDTNIIQRVEDFVNAATSQASVTRTNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNLDGRVNALYSTPSIYTDAKNAANETLPLKTDDYFPYADGANGYWTGYYTSRPALKRYVRSLSGYYLAARQLEFLAGKKSTTGSNTFDLGEALGVAQHHDAVSGTAKQHVTDDYAKRLAIGASKAEKVSSTSLACLSGKKSSGHCSAPATAFAQCQLLNISYCPQTEDNIPEAKSLVVVLYNPLGWNRTEIVRIPVNDDNLVVKDSSGNIIEAQYVDTDNVTKNLRSFYVEAYLGVQPKEAPKYSLLFQVSVPPLGWSTYFISKASGNGKKRSPFLSQLISGDTVTIGPGDLKMSFSSTSGQLQRMFNSKTGVDIPVQQSYLWYASSGGSFPDYQASGAYIFRPTESRPTVVSRSIPYKVIRGPLVDEIHQEFNSWIYQVIRLYKDKDHAEVEYTVGPIPTDDGVGKEVITQITANMATNKEFYTDSNGRDFLKRVRDYREDWPLQVTQPVAGNYYPINLGIYVKDQKSELSVLVDRATGGASIRDGEMELMLHRRILQDDGRGVGEALDEIDCAKDYGCKGLTVRGNYYLGIHKLGSGSRWRRATGQEIYSPLLLAFTYESLKNWKSSHVTKGTVLEPNYSLPPNVALLTLEELDGGSVLLRLAHLYEQSEDAEYSTLAKVELKKLFARKQIKELKEMSLSANQEKSEIKKMNWNVEGEINGKEPKPLRGRPVNTFNFVVELGPMEIRTFLLKF 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01061 1030 Gene3D Glycoside hydrolase family 38, central domain 342 420 IPR037094 GO:0004559|GO:0006013
Arst1g01061 1030 Gene3D Glycoside hydrolase 38, N terminal domain 60 341 IPR027291 -
Arst1g01061 1030 FunFam Alpha-mannosidase 421 477 - -
Arst1g01061 1030 Gene3D - 910 1030 - -
Arst1g01061 1030 Coils Coil 954 974 - -
Arst1g01061 1030 SUPERFAMILY Glycoside hydrolase/deacetylase 49 375 IPR011330 GO:0005975
Arst1g01061 1030 FunFam Alpha-mannosidase 489 600 - -
Arst1g01061 1030 SUPERFAMILY Families 57/38 glycoside transferase middle domain 378 479 IPR028995 -
Arst1g01061 1030 FunFam Alpha-mannosidase 621 887 - -
Arst1g01061 1030 FunFam Alpha-mannosidase 340 420 - -
Arst1g01061 1030 Gene3D - 619 887 - -
Arst1g01061 1030 SMART Alpha_mann_mid_2 378 453 IPR015341 GO:0004559|GO:0006013
Arst1g01061 1030 SUPERFAMILY Galactose mutarotase-like 487 1030 IPR011013 GO:0003824|GO:0005975|GO:0030246
Arst1g01061 1030 Gene3D - 499 617 IPR013780 -
Arst1g01061 1030 FunFam Alpha-mannosidase 907 1030 - -
Arst1g01061 1030 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 921 1027 IPR041147 -
Arst1g01061 1030 Pfam Alpha mannosidase middle domain 379 471 IPR015341 GO:0004559|GO:0006013
Arst1g01061 1030 CDD GH38N_AMII_LAM_like 60 336 - -
Arst1g01061 1030 Gene3D Glycoside hydrolase family 38, central domain 421 477 IPR037094 GO:0004559|GO:0006013
Arst1g01061 1030 FunFam Alpha-mannosidase 60 341 - -
Arst1g01061 1030 PANTHER ALPHA-MANNOSIDASE 28 1030 - -
Arst1g01061 1030 PANTHER ALPHA-MANNOSIDASE 28 1030 - -
Arst1g01061 1030 Pfam Glycosyl hydrolases family 38 C-terminal domain 625 838 IPR011682 GO:0004559|GO:0006013
Arst1g01061 1030 Pfam Glycosyl hydrolases family 38 N-terminal domain 61 373 IPR000602 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01061 Arst-Chr1 10581966 10592410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01061 29 976 Glycoside Hydrolase AT3G26720 59.832 0.0 1180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01061 K01191 - gmx:100775419 1644.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01061 1 10581966 10592410 Arst1g01061 1 10581966 10592410 ECH
Arst5g00524 5 4372335 4378519 Arst1g01061 1 10581966 10592410 PCT
Arst1g01061 1 10581966 10592410 Arst5g00525 5 4372335 4378519 PCT