Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00525 ATGGGAAAGAGAACGAAACCAGTTTCAGAGTATCTAAATGCTCTCTCATTGTTTTGTTTATATTGCAGAGTAGTGATTTCTGCAAAGCACAACACTGGAGCAGGTGTAGTCCCAGGCAAAATCAATGTTCATCTTGTTCCACATTCCCATGATGATGTTGGTTGGCTCAAAACTGTTGACCAATACTATGTTGGATCAAACAGAACTATTCAGGTGGCATGTGTTGAGAATGTGCTGGACTCTGTGGTTATGTCACTGCAGAAGGACCCAAATAGGAAATTTGTGTTTGCTGAAATGGCATTTTTCAATAGATGGTGGGTAGAACAAAATCAAGAGACACAAGCAATAGTGAGAAAGCTTGTGGATGCAGGGCAGCTAGAATTCATAAACGGTGGTTGGTGCATGCATGATGAAGCAACCACCCATTACATAGACATGATTGATCAAACTACATTTGGTCATCTCTTCATCAAGAAACACTTCAACAAGGTCCCTCGAGCCGGGTGGCAGATTGATCCATTTGGGCATTCTGCTGTTCAAGCTTATCTCCTTGGTGCTGAGCTTGGGTTTGAATCTCTACACTTTGCTAGGATTGATTATCAGGATAGAGATAAGCGAAAAGTTGATAAATCTCTCGAAGTTGTGTGGCGTGGATCCAAAACATTTGAATCTTCAGCACAGATTTTTGCCAATGCTTTTCCGGTTCATTATAGTCCACCAGCAGGTTTTCATTTTGAAATCGATGATACCTATGATCCCATCCAGGATGATCCTCATCTATTTGATTACTATGTTAAAGATCGAGTTGAGGACTTCATTGCTGCTGCTGTTGCACAAGCAAATGTGACTAGAACAAACCATGTTATGTGGACAATGGGCGATGATTTCCAATACCAATATGCAGAAACTTGGTTCAAGCAAATGGATAAACTAATTCACCATGTTAATAAGGATGGCAGAGTGAATGCTTTGTATTCTACACCATCACTTTACACTGATGCTAAAAATGCAGCAAACCAATCATGGCCTCTGAAAACTGACGACTACTTTCCGTATGCAGATAGAGTAAATGCTTATTGGACAGGATATTTCAGCAGTCGCCCTGCATTTAAGAGATATGTTAGGATGCTGAGTGGATACTACTTGACAGCGCGTCAACTTGAATTCTTGGCTGGAAAGAAAACCACAGTAAGCCAGATTTATGACCTTGGAGATGCTCTAGCAATTGCACAGCATCATGATGCTATTTCTGGTACTGCCAAGCAGCATACAACTAATGACTACATGAAAAGGCTCGCTATTGGAGCATCTAAGGCTGAAGCTGTCATTAGTTCTTCTTTGGCTAATCTTGCTAGCAAGAATCCTGGAGTTCATCACTCAACACCTGCATCGGTATTTTCCCAGTGTCAACTACTCAATATCAGTTACTGCCCACCAACATCAGACAATAATCTTCAAGGAAAAAGTTTGGTGTTAGTGGTATATAATCCACTTGGATGGAATCGTTCTGATATTATCAGAATACCAGTTAATGATGCTAATCTTGTTGTCGAAGATTCGTTCGGGAATAAGGTCGAAACACAATATGTGGAAGTGGATAATGTTACAAGAAATTTAAGAGAATTATATGTCAAGGCCTATTTAGGATTCTCACCAAAGCAAGCCCCAAAATACTGGCTTCTGTTTCAGGTGTCAGTGCCTCCTCTTGGATGGACTACATACTTCATTTCTAGAGCACTGGGAAAAGGCAAAGGTAGAAATGGATTTGTCTCATCACATTCAATCATTCAGAAAAACAAGACCATTGAATTAGGACCCGGAAATTTGAAGATGTCCTTTTCTTCCAAGTCTGGAAAACTTGAAAGGATGTATAATTCAAGAACTGGAGTTGATATACCAATTCAGCAAAGCTATCTCTGGTATGGCTCTAGCGACGAGTCGGATCAGGCTTCTGGTGCATATATATTCCGGCCTAATGGATCCTCTCCAAGTATTGTTTCAAGATCAGTGTCCTACAAGGTAGTTCAAGGACCACTAGTTCATGAGGTACATCAGAATATTAGTTCTTGGATTTACCAGGTCACTAGGCTCTACATAGATAAAGAGCATGCTGAAGTTGAATACACTATTGGTCCAATTCCCACAGATGATGAAGTTGGGAAAGAGGTGATCACACAAATGACATCAAATATGGTTACAAACAAGGAATTTTATACTGATTCTAATGGAAGAGATTTTCTCAAACGGGTTCGAGGTTATAGGGAAGATTGGCCCCTTGAAGTTAATCAACCTGTAGCAGGAAACTATTATCCACTTAATTTAGGAATTTATATTAAGGATAAGAAGTCTGAATTCTCAGTCCTAGTTGATCGTGCCACTGGTGGCGCGAGCATTAGAGATGGTGAGGTGGAACTAATGCTTCATAGGCGCATGCTCACCGAGGATGGCAGAGGAGTAGGCGAATCACTTGATGAACAAGTTTGCATAGATGATAAATGCCAAGGGCTAACAGTAAGAGGAAACTATTACATGGGCATCCACAAACTAGGAGATGGTTCCCGGTGGCGCCGTTCAACTGGTCAGGAAGTTTACTCCCCACTCTTATTGGCTTTTACACACGAGAACATAGGAAATTGGAAGTCCTCATATTTGAGCAAAGGAACTTTGATGGACCCAAATTACAGCTTGCCTCCCAATGTTGCTTTGATAACTCTTGAGGAATTGGATGATGGCAGTGTGCTCCTCCGTTTGGCACATCTATATGAGCAAGGTGAAGATGCTCACTATTCAAGTTTGGCCAAAGTTAAATTGAAGAGAATGTTTGCCTCAAAAAAGATAAAGGAATTAAAGGAGGTTAGTTTATCAGCAAACCAAGAGAAGTCAAACATGAAGAAGAAGACATGGAAGGTTGAGGGCGACAAGGGGCAACAACCACCACCACCACTTAAAGGTGGACCTGTTAACAGTTTCCATCTTCTTGTTGAGCTTGGCCCCATGGAAATACGTACATTCCTCTTGAAATTTTGA 3027 0.4096 MGKRTKPVSEYLNALSLFCLYCRVVISAKHNTGAGVVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNRTIQVACVENVLDSVVMSLQKDPNRKFVFAEMAFFNRWWVEQNQETQAIVRKLVDAGQLEFINGGWCMHDEATTHYIDMIDQTTFGHLFIKKHFNKVPRAGWQIDPFGHSAVQAYLLGAELGFESLHFARIDYQDRDKRKVDKSLEVVWRGSKTFESSAQIFANAFPVHYSPPAGFHFEIDDTYDPIQDDPHLFDYYVKDRVEDFIAAAVAQANVTRTNHVMWTMGDDFQYQYAETWFKQMDKLIHHVNKDGRVNALYSTPSLYTDAKNAANQSWPLKTDDYFPYADRVNAYWTGYFSSRPAFKRYVRMLSGYYLTARQLEFLAGKKTTVSQIYDLGDALAIAQHHDAISGTAKQHTTNDYMKRLAIGASKAEAVISSSLANLASKNPGVHHSTPASVFSQCQLLNISYCPPTSDNNLQGKSLVLVVYNPLGWNRSDIIRIPVNDANLVVEDSFGNKVETQYVEVDNVTRNLRELYVKAYLGFSPKQAPKYWLLFQVSVPPLGWTTYFISRALGKGKGRNGFVSSHSIIQKNKTIELGPGNLKMSFSSKSGKLERMYNSRTGVDIPIQQSYLWYGSSDESDQASGAYIFRPNGSSPSIVSRSVSYKVVQGPLVHEVHQNISSWIYQVTRLYIDKEHAEVEYTIGPIPTDDEVGKEVITQMTSNMVTNKEFYTDSNGRDFLKRVRGYREDWPLEVNQPVAGNYYPLNLGIYIKDKKSEFSVLVDRATGGASIRDGEVELMLHRRMLTEDGRGVGESLDEQVCIDDKCQGLTVRGNYYMGIHKLGDGSRWRRSTGQEVYSPLLLAFTHENIGNWKSSYLSKGTLMDPNYSLPPNVALITLEELDDGSVLLRLAHLYEQGEDAHYSSLAKVKLKRMFASKKIKELKEVSLSANQEKSNMKKKTWKVEGDKGQQPPPPLKGGPVNSFHLLVELGPMEIRTFLLKF 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00525 1008 SUPERFAMILY Families 57/38 glycoside transferase middle domain 358 458 IPR028995 -
Arst5g00525 1008 SUPERFAMILY Galactose mutarotase-like 465 1008 IPR011013 GO:0003824|GO:0005975|GO:0030246
Arst5g00525 1008 Gene3D Glycoside hydrolase 38, N terminal domain 41 321 IPR027291 -
Arst5g00525 1008 FunFam Alpha-mannosidase 468 579 - -
Arst5g00525 1008 CDD GH38N_AMII_LAM_like 41 317 - -
Arst5g00525 1008 FunFam Alpha-mannosidase 401 456 - -
Arst5g00525 1008 Pfam Glycosyl hydrolases family 38 C-terminal domain 605 817 IPR011682 GO:0004559|GO:0006013
Arst5g00525 1008 Gene3D - 889 1008 - -
Arst5g00525 1008 PANTHER ALPHA-MANNOSIDASE 27 1008 - -
Arst5g00525 1008 PANTHER ALPHA-MANNOSIDASE 27 1008 - -
Arst5g00525 1008 Pfam Alpha mannosidase middle domain 358 450 IPR015341 GO:0004559|GO:0006013
Arst5g00525 1008 Coils Coil 946 966 - -
Arst5g00525 1008 Pfam Glycosyl hydrolases family 38 N-terminal domain 42 353 IPR000602 GO:0004559|GO:0006013
Arst5g00525 1008 SUPERFAMILY Glycoside hydrolase/deacetylase 34 354 IPR011330 GO:0005975
Arst5g00525 1008 Gene3D Glycoside hydrolase family 38, central domain 322 400 IPR037094 GO:0004559|GO:0006013
Arst5g00525 1008 Gene3D Glycoside hydrolase family 38, central domain 401 455 IPR037094 GO:0004559|GO:0006013
Arst5g00525 1008 FunFam Alpha-mannosidase 885 1008 - -
Arst5g00525 1008 MobiDBLite consensus disorder prediction 956 984 - -
Arst5g00525 1008 FunFam Alpha-mannosidase 320 400 - -
Arst5g00525 1008 Gene3D - 602 865 - -
Arst5g00525 1008 FunFam Alpha-mannosidase 41 321 - -
Arst5g00525 1008 FunFam Alpha-mannosidase 603 865 - -
Arst5g00525 1008 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 899 1005 IPR041147 -
Arst5g00525 1008 Gene3D - 468 579 IPR013780 -
Arst5g00525 1008 SMART Alpha_mann_mid_2 358 432 IPR015341 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00525 Arst-Chr5 4372335 4378519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00525 12 954 Glycoside Hydrolase AT3G26720 58.237 0.0 1174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00525 K01191 - gmx:100806748 1599.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00525 5 4372335 4378519 Arst5g00525 5 4372335 4378519 ECH
Arst1g01061 1 10581966 10592410 Arst5g00525 5 4372335 4378519 PCT